Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_09431 |
Symbol | umuC |
ID | 4779451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 870671 |
End bp | 871948 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640084220 |
Product | putative UmuC protein |
Protein accession | YP_001014766 |
Protein GI | 124025650 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0552438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAG TAATACTTCA AATTGATGGG AATAATTTCT ATGCTTCGTG TGAACAAATG ATCGATCCTT CCATAAAAGG AAAGGGATTA GTAGTACTTT CGAATAATGA TGGATGCATA ATAGCTCGCA GTTCAGAGGC CAGAAGAATG GGAATTCCTA TGGGACAGCC TTATTTCAAG TTAAAGAATA AACTAACTCA ATTAAATATA AATGTGAGAA GTTCAAATTA CGAATTGTAC GGTGATATAA GTAATCGATT AATGCAACTA CTAAGAAAAA ATTGTGAAGA ACTGGAAATT TACTCTATAG ATGAAGCGTT TGGAACTATA AAACGTCCAA AGGAAAAGTG CTTATACAAA TGGGGAAAAG ATTTAAGGGC TTTGGTTTAT CAAAACATAG GAATACCAAT ATCTATTGGT ATTGGTGAGA CAAAAGTTCT ATCAAAAATT TCTAATCATC TAGCAAAAAA GATACAAACG AATTCAGGTA TATTTGATAT AGGTCTTGTT GAAAATAAAG ATCATTATCT TGATCTAATT AAAGTAGATA AAGTTTGGGG TATCGGCAAA AGGATGTCTA AATGGCTAAA AGACAGAGGC ATCACTAATG CGAGAGAACT TAGAGATATG TCAAGCGACC AAATCAAAGG AAAGTATGGT GTAGTTGGTC TACGCATTCA AAATGAATTA AAAGGAAACC TCTGTATCCC TATAAAAGAG AACTCATCAG ATCGAAAAGA AATCTGCGTA AGCAGGAGTT TTGCACATCC CATAGATAGC TTAGATGATT TGAGCCAAGC AATTATTAAA TACGTTTTAA TCGCAAGTGC TAAGTTGCGA AAATATAATC AATTATCTTC AGCTATTACG CTTTTTACGA ATACAAATAC TCATTCAAAA GATTTTTTCA GGAGTGAAGC AACAGCAAAA ATAAGCGTTC CAACTTCTAA CTCAAAGATC ATGATTGAAA AAAGTCTATC ACTAACAAAA GAAATTTTTA AACCATATAA AAAATTTATA AAAGCAGGTG TAATATTGCA TAAACTTCAA AGCAATCAAT ATAAACAAAA CCTAATATTT GATGCACAGA ATATTAAAGA AGAATTATAC TTACAGAGAC TGGATAATGT AATAGATAAT ATTAACTCGA AAAATGGTAT AGATACAATA AATTGGGGAT CATCAATGAT GGATACAGAA TGGAGACCCC GAAGAAAAAA TCTATCTAGT ATAAAAACAA CAAATATAGA AAATATTCCA ACTATATATG CTAATTAG
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Protein sequence | MSKVILQIDG NNFYASCEQM IDPSIKGKGL VVLSNNDGCI IARSSEARRM GIPMGQPYFK LKNKLTQLNI NVRSSNYELY GDISNRLMQL LRKNCEELEI YSIDEAFGTI KRPKEKCLYK WGKDLRALVY QNIGIPISIG IGETKVLSKI SNHLAKKIQT NSGIFDIGLV ENKDHYLDLI KVDKVWGIGK RMSKWLKDRG ITNARELRDM SSDQIKGKYG VVGLRIQNEL KGNLCIPIKE NSSDRKEICV SRSFAHPIDS LDDLSQAIIK YVLIASAKLR KYNQLSSAIT LFTNTNTHSK DFFRSEATAK ISVPTSNSKI MIEKSLSLTK EIFKPYKKFI KAGVILHKLQ SNQYKQNLIF DAQNIKEELY LQRLDNVIDN INSKNGIDTI NWGSSMMDTE WRPRRKNLSS IKTTNIENIP TIYAN
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