| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_09141 |
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| Symbol | amyA |
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| ID | 4780555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 845213 |
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| End bp | 846964 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640084190 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001014737 |
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| Protein GI | 124025621 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000264002 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCTGAGT TGGATAGTGA ATTAGACGAG CTGAGATTGT CTCTCAGAGA AATTTATCCT
GAGCACTCTG AACAAGAAAT CAATTCAGTG TGGTCGCAAT TGTTGCAGAT TCTTGATCCA
TTTTGTGTTA GCAAGGGCAC TGATGAATTT GAGATCGAAT CAATTTGGGA TTCTTCAAGT
GTTGTTTTGA TTACTTACCC TGATTCAATT TATAGGAAAG ATGAATCAAC TTTAAAAACA
TTAACTGAAT TCGTAAAAAA TAGATTAGGT GGCCTTTCAT CAGTCATACA TGTTTTACCA
TTTCTTCCTT CTACAAGTGA TGGAGGATTC GCTGTATCTA ATCATGAAAA AATCGATGAT
ACCTTTGGGA ATTGGAATGA TTTAAAAGAT TTATCTAGTA AGCATAAAAT AATGGCAGAT
CTAGTTTTAA ATCATGTCTC TTCTTCTCAT CCATGGGTTC ATCAATTTAT AAAATCAGAG
GATCCAGGTC CGTCTTACAT TGTTTCTCCT TCTGAGACTA ATGTTTGGGA AAATGTGATA
AGGCCCAGAA ATACATCACT CTTTACCAAT ATCAATACTA AACAAGGCTT TAAGAGTGTT
TGGACAACCT TTGGACCAGA TCAGATTGAT GTTGATTGGA GGAATCCACA TATCTTTTTA
GAGTTTTTGA AATTATTGGT TAGATACATA ACTAATGGAG CTGACTGGAT TCGACTTGAT
GCAATTGCAT TTATTTGGAA GGAGCCACAT ACTACTTGTT TACATTTAGA CCCAGTACAC
TCAATAGTTA AGCTGTTAAA TAAATGTTTG AAGATTATAA AACCTTCGGC AGTATTAATT
ACCGAGACTA ATGTGCCAGA GAAAGAAAAC CTTTCTTATT TGATTGAAGG AAATGAAGCT
AATCTTGCAT ATAACTTTAC TCTACCTCCT TTATTATTAG AAGCTATTTA TACCGGTAAA
ACAGATTTAT TGAAGAGTTG GTTGTCTACG TGGAAAGAGT TGCCAAGGCA CACTTCTTTG
CTCAACTTCA CTTCTTCACA CGATGGTATT GGATTACGAG CACTAGAAGG CATTATGGAC
GATCAGAGAA TACATAATCT CTTGGTTGAA TCAGAGAAAC GAGGAGGATT AGTTAGTCAT
CGTCGCTTGT CAAATGGAGA TGATCAACCT TATGAATTAA ACATTAGTTG GTGGAGTGCG
ATGTCAAACG AAGGCTCCGA TAAAACGGTA TTTCAATTTG AGCGTTTTTT ATTAAGTCAG
CTTTTTACTT TATCCATAAA AGGTGTTCCA GCTTTTTATC TTCCATCTGT ATTAGCTTCT
CCGAATGATA TAGATTCTTT TAGGAAAACA GGGCAAAGAA GAGATTTAAA TCGAGAAAAA
TTTGAAGCTA ACCAATTACT TGATGTACTT AAGAACTTTG ATTCTCCCGC TAGTAAAAAT
ATTTCATACC TCACTCATAT AGTTAAAGTC AGGTCAAGAC TTAAAGCTTT TCATCCGGAG
GCGAGTATGA AATGTATCTC TACGAATATA GCTAATTGTA TAATTCTTCA AAGAGGTTTG
GATGAAGATA CTGTCTATGT TATTTGTAAT ATGTCTAGTA AATTCTTATC TATTTCTCCA
TTAAATCAAA TTAATTCATT AGAATTAACC TCTGAAAAAC GTTTACTAGA TAATATTTCA
GGTTCTTATT TTAATACTGA TACTTTTAAA CTTAATCCTT ATCAAGTCGT TTGGCTTACA
TTAGCTGATT AG
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| Protein sequence | MSELDSELDE LRLSLREIYP EHSEQEINSV WSQLLQILDP FCVSKGTDEF EIESIWDSSS
VVLITYPDSI YRKDESTLKT LTEFVKNRLG GLSSVIHVLP FLPSTSDGGF AVSNHEKIDD
TFGNWNDLKD LSSKHKIMAD LVLNHVSSSH PWVHQFIKSE DPGPSYIVSP SETNVWENVI
RPRNTSLFTN INTKQGFKSV WTTFGPDQID VDWRNPHIFL EFLKLLVRYI TNGADWIRLD
AIAFIWKEPH TTCLHLDPVH SIVKLLNKCL KIIKPSAVLI TETNVPEKEN LSYLIEGNEA
NLAYNFTLPP LLLEAIYTGK TDLLKSWLST WKELPRHTSL LNFTSSHDGI GLRALEGIMD
DQRIHNLLVE SEKRGGLVSH RRLSNGDDQP YELNISWWSA MSNEGSDKTV FQFERFLLSQ
LFTLSIKGVP AFYLPSVLAS PNDIDSFRKT GQRRDLNREK FEANQLLDVL KNFDSPASKN
ISYLTHIVKV RSRLKAFHPE ASMKCISTNI ANCIILQRGL DEDTVYVICN MSSKFLSISP
LNQINSLELT SEKRLLDNIS GSYFNTDTFK LNPYQVVWLT LAD
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