Gene NATL1_09011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_09011 
Symbol 
ID4779142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp836142 
End bp837140 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content36% 
IMG OID640084177 
Productputative multidrug efflux ABC transporter 
Protein accessionYP_001014724 
Protein GI124025608 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000266178 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCACAATA ATCCTAGTGA CTTGATCGTT GTAGATCAGC TGAGTAAATA TTATCGAGTT 
GCAAACAAAC AGCCTGGGTT TAAGGGTACT CTTAAACATT TTTTCGATCG AAAGACTTAT
GACGTCCCTG CCGTTACTGA TATTAGTTTT AAAATCTCAC CGGGAGAGGT AGTCGGATTT
CTTGGGGCTA ATGGAGCTGG TAAGACCACA TTATTGAAAA TGATGTGTGG TCTTATTCAT
CCATCGAAAG GGTTAGTTGA TGTTGGTGGT TTCTCTCCTC AAAGAAGGCA AACGGCTTTT
CTTAAAGAGA TAACTTTGGT TATGGGGCAA AAGCAGCAGT TGATTTGGGA TCTTCCTCCC
ATGGACTCTT TGTATGTAAA CGCAGCTGTA TATGGTTTGT CTGACCACGA AGCAAAAGTA
AGAATTAATG AATTGGCAGA AATGCTTGAA CTAGGAGAAG AACTTACAAG ACCTGTAAGA
AAGTTGTCGT TAGGACAAAG AATGAAATCT GAAATTCTTG CTGCCTTATT GCATAAACCA
TCAGTCCTTT TTTTAGATGA ACCTACTCTT GGTCTAGATG TAAATGCTCA AGCTAGAGTT
CGTAGTTTTT TATCTGAATA CAATAAAAGA ACTGGAGCGA CAATATTGCT GACTAGTCAT
TACATGGCTG ATATAACAGC TTTATGTCCA AGAGTTATTT GTATTCATCA AGGAAAGCTT
TTTTATGATG GTGACCTTGA TTCCCTAGCT AATTCATTAT CTCCCTCAAG AGAGGTAAAA
GTTGAATTGA AAAATCAATG TGCAAGTGAA CAATTTGAAA AATATGGTGA GATTCAAGAT
TTAAATGATC GTTTTGTATG TTTATTAGTT TCAAGGGATA AATTGACAGA TGTAGTAAGT
AATCTATTAA CTGATTTCGA TATTATCGAT TTAGAGATTA GTGATCCTCC TATTGATCAA
TTAATTGGAG AATTATTTAT TAAAGGTGAA GTCAATTGA
 
Protein sequence
MHNNPSDLIV VDQLSKYYRV ANKQPGFKGT LKHFFDRKTY DVPAVTDISF KISPGEVVGF 
LGANGAGKTT LLKMMCGLIH PSKGLVDVGG FSPQRRQTAF LKEITLVMGQ KQQLIWDLPP
MDSLYVNAAV YGLSDHEAKV RINELAEMLE LGEELTRPVR KLSLGQRMKS EILAALLHKP
SVLFLDEPTL GLDVNAQARV RSFLSEYNKR TGATILLTSH YMADITALCP RVICIHQGKL
FYDGDLDSLA NSLSPSREVK VELKNQCASE QFEKYGEIQD LNDRFVCLLV SRDKLTDVVS
NLLTDFDIID LEISDPPIDQ LIGELFIKGE VN