Gene NATL1_05391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05391 
SymbolhflC 
ID4780463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp487283 
End bp488086 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content37% 
IMG OID640083816 
ProductBand 7 protein 
Protein accessionYP_001014366 
Protein GI124025250 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.289277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTC CATTTCGTAA TGTGACTCCG AATGGACCAG GTGGCACAAC AACTCTTCTA 
CTTGTCCTTT CCTTTACTGG TTTTTTACTT CTTACTCAAG CATTTTTTGT CGTTCCGGCT
GGTCAGGTTT CAGTAGTAAC TACATTAGGA AAAGTCAGTG GGGGATCACG CAAACCTGGC
TTGAATTTTA AAGTTCCTTT TGTTCAAAAT ACCTATCCAT TTAATGTGCA AACTCAAGTT
AGACCAGAGA AATTTGATTC ATTAACAAAA GATTTGCAGG TTATTTCTGC AACCGCCACT
GTTAAATATG CTCTAAAACC TAATGAGGCT GGGAGAGTCT TTAAAACTAT CTCTTATAAC
GACAGAGAGA TATATAACAG GATTATTCAA CCATCACTAC TTAAAGCACT CAAGTCGGTC
TTCTCAAAGT ATGAGTTGGT AACCATAGCT AGTTCATGGA GTGATATTTC AGAATTAGTT
GAGGATACGG TTGCAGAGGA ACTCAATAAG TTTGACTATG TTGATGTTCA ATCTCTTGAT
TTAACTGGTT TGACAATTGC AGATGAATAT CGAGCAGCTA TTGAACAAAA ACAGATTGCT
GAGCAGCAAT TATTGAGAGC TCAAACCGAA GTTAAAATTG CAGAGCAAGA AGCTCTTAGA
TATGACACCC TAAATAAAAG TCTTGATGAT CAAGTTCTTT TCAAATTGTT TTTAGATAAA
TGGAATGGTG AGACACAAGT TGTTCCTTCA TTGCCAGGAA ATGGTTCAGG AAATGTTCCT
GTAATTGTTA GAGGAAAAAA CTAA
 
Protein sequence
MTTPFRNVTP NGPGGTTTLL LVLSFTGFLL LTQAFFVVPA GQVSVVTTLG KVSGGSRKPG 
LNFKVPFVQN TYPFNVQTQV RPEKFDSLTK DLQVISATAT VKYALKPNEA GRVFKTISYN
DREIYNRIIQ PSLLKALKSV FSKYELVTIA SSWSDISELV EDTVAEELNK FDYVDVQSLD
LTGLTIADEY RAAIEQKQIA EQQLLRAQTE VKIAEQEALR YDTLNKSLDD QVLFKLFLDK
WNGETQVVPS LPGNGSGNVP VIVRGKN