Gene NATL1_05171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05171 
SymbolpetC 
ID4780787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp471422 
End bp471958 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content43% 
IMG OID640083792 
Productcytochrome b6-f complex iron-sulfur subunit 
Protein accessionYP_001014344 
Protein GI124025228 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.900646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.384843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAA TGACAACTGC AGATGTGCCC TCAATGGGCA GAAGGCAGTT CATGAATCTG 
CTTACTTTTG GAACAGTTAC AGGGGTTGCT TTAGGAGCGT TATATCCAGT AGCCCAATAC
TTCACCCCAT ATAGGGCTGG TGGTGGTGGT GGTGGAACAA ATGCAAAAGA TGAGTTAGGA
AATAATGTAA GTGCAAGTGG TTGGCTATCA ACCCATCCAG TTGGTGATAG AAGTTTGGTT
CAAGGACTTA AAGGTGATCC AACCTACCTA ATAGTTGAAG GCGAGGATGC AATTACTAGT
TACGGAATCA ATGCTATTTG TACTCACCTT GGTTGTGTAG TGCCATGGAA TAGCGGAGCA
AATAAATATA TGTGTCCATG TCATGGAAGT CAATACGATT CAACAGGAAA AGTTGTTAGA
GGACCAGCCC CTCTATCTCT AGCCATAGCT CATGTCTCAA TTGAGGATGA TCAAGTTCTA
GTAAGTCAGT GGACAGAAAC TGATTTTCGA ACTGGTACTG ATCCTTGGTG GGGATGA
 
Protein sequence
MTQMTTADVP SMGRRQFMNL LTFGTVTGVA LGALYPVAQY FTPYRAGGGG GGTNAKDELG 
NNVSASGWLS THPVGDRSLV QGLKGDPTYL IVEGEDAITS YGINAICTHL GCVVPWNSGA
NKYMCPCHGS QYDSTGKVVR GPAPLSLAIA HVSIEDDQVL VSQWTETDFR TGTDPWWG