Gene NATL1_04571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_04571 
SymbolqueA 
ID4779155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp418643 
End bp419740 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content38% 
IMG OID640083734 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_001014286 
Protein GI124025170 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.547265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAGATC AAAAAGATAA TCTTTTAAGC TCATATAACT ATGATTTACC TAAAGATTTA 
ATTGCTCAAT CACCTACCAG GAGTAGGCAT GATGCCAAAT TGATGATTAT AAAAGATGGC
CTCGATGATT CTTTAAACCT TGTGCATGCA AAGGTATGGG ACATAAAGGA TATCTTGAAG
CCTGCCGATC TTTTAGTTGT TAATAATACG CGAGTTGTTA AAGCAAGATT GAAAATTCGA
TTGTCAGGTG GAGGGGCAGG TGAATTATTG ATAATGGAAC CTAGGGGTGA TGGCCGATGG
CTTTGTCTTG GTCGTCCTGC TAGGCGTATG AGAGGAGGTG ATCAATTGTG GTTGGATACG
TCACGAGATA ATTCTTTAAT CTTGAAAGTT ATTGATAAGG ATGAGAAAAC AGGCGGAAGA
ATTATTCAAT TTTCAAATGA GTTTACTAGT TGGACAGAAA TGGAAAATTT ACTTGATTTA
TGTGGAGAAG TCCCATTGCC TCCATATATA GATAAGGACA GATCTAGTGG TCATGAGGAA
AACTATCAGA CTAGATTTGC TTCGAAACCA GGAGCCATAG CTGCTCCCAC AGCGGGCTTA
CATCTAAGTG ATGAACTTAT AGAAAATTTA AAAATCAGAG GCATTAGAAT TGCGCAAATT
ACTTTGCATG TTGGCTTAGG AACCTTTAGA CCACTAGAAA AAGAAGACCT ATCTCAGCTG
CATTTACATA GTGAGTGGAT AGAGGTTACT GAAGAGACCA TAAAAGCGAT AACTACTTGT
AAGGAAGAGG GGGGGAAAGT CTTTGCTGTA GGTACTACAA GTGTGAGAGC CCTTGAGGCT
GCTTACCTTT CAGGAAGAGG CGCCTTGAAG CCGTATGAAG GCAAAGTCAA TTTGGTAATT
AAACCAGGAT TTAAATTTTC CGTCATTGAT GGATTGCTAA CTAACTTCCA CCTACCTAAA
AGTTCCCTAT TACTTTTAGT TAGCGCTCTA ATTGGTCGAA ATCGTATGTT GAAACTTTAT
AAACATGCTA TCTCTAACAA ATATCGATTT TTCTCTTATG GAGATGCGAT GTTAATAACA
CCTGAGTCGG TTATTTAA
 
Protein sequence
MLDQKDNLLS SYNYDLPKDL IAQSPTRSRH DAKLMIIKDG LDDSLNLVHA KVWDIKDILK 
PADLLVVNNT RVVKARLKIR LSGGGAGELL IMEPRGDGRW LCLGRPARRM RGGDQLWLDT
SRDNSLILKV IDKDEKTGGR IIQFSNEFTS WTEMENLLDL CGEVPLPPYI DKDRSSGHEE
NYQTRFASKP GAIAAPTAGL HLSDELIENL KIRGIRIAQI TLHVGLGTFR PLEKEDLSQL
HLHSEWIEVT EETIKAITTC KEEGGKVFAV GTTSVRALEA AYLSGRGALK PYEGKVNLVI
KPGFKFSVID GLLTNFHLPK SSLLLLVSAL IGRNRMLKLY KHAISNKYRF FSYGDAMLIT
PESVI