Gene NATL1_04401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_04401 
SymbolcobI 
ID4779368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp403538 
End bp404266 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content38% 
IMG OID640083717 
Productprecorrin-2 C20-methyltransferase 
Protein accessionYP_001014269 
Protein GI124025153 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR01467] precorrin-2 C20-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.614023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTT TGACTATTGC TGGCGTAGGG CCAGGTGATC CTTCTTTATT AACTTTGGCA 
GCAGTTGATG CCATTCAAGA ATCAACAGTT GTTTCTTATC CAGTCTCTAC GAGAGGAGGA
GCTAGTCTTG CTGAAAAAAT TGCTTCAAAA TGGATAACCA AAGATAAAAA AAAATTACCT
TTACATTTTC CCATGGTTGA CGATCAGAAC ACTTTAAAAA GTGCATGGCG AGTTGCTGGG
AGAGAATTAA TGAAGATGGT TGACAAAGGT GAAAGAGTTG TTTTCCTTGC TCAAGGAGAT
ATCTCGCTTT TCTCGACAGG TTCTTATCTT TCAAAGGAGT TAGAAAAATA TCATCCAGAG
TGCGTTGTTA AATTAATTCC AGGTGTGACA TCTTTTTCTG CAGCCGCTGC AAAAAGTAAA
TTACCACTTG CTTTTCAAGA GGAAGAATTA CTTGTATTAC CTGTTCCAGA CTCATATGAC
GAGCTAAAGT CTATTTTGTC TGATGCAGAG TCAAAGAAAA GGGTAGTTGT TTTGCTCAAG
CTTGGTAAAA AATGGGAATG GGTCAAACTT TTGCTTGAAG AACTTGATCT AATAAAAATT
TCTATATTCG CAGAAAGAAT AGGATTTTCA GATCAACAAA TACTTAGGGC ATCTGACCTA
CCCTCAGGGA CTAGGCCATA TTTTTCTTTA CTGCTGATTC GACAAAGTTG GCCTTTGACA
ATGCCCTAA
 
Protein sequence
MKVLTIAGVG PGDPSLLTLA AVDAIQESTV VSYPVSTRGG ASLAEKIASK WITKDKKKLP 
LHFPMVDDQN TLKSAWRVAG RELMKMVDKG ERVVFLAQGD ISLFSTGSYL SKELEKYHPE
CVVKLIPGVT SFSAAAAKSK LPLAFQEEEL LVLPVPDSYD ELKSILSDAE SKKRVVVLLK
LGKKWEWVKL LLEELDLIKI SIFAERIGFS DQQILRASDL PSGTRPYFSL LLIRQSWPLT
MP