| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_03731 |
|---|
| Symbol | ndhK |
|---|
| ID | 4779522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 346294 |
|---|
| End bp | 347043 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640083641 |
|---|
| Product | NADH dehydrogenase subunit B |
|---|
| Protein accession | YP_001014202 |
|---|
| Protein GI | 124025086 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.23212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTGA ATCCCTTGAA AAAATCTCCC TCTTCTGAAG CTGTAAGAAA TCTTAGAGAA
GCTTCCTGCG GTCCAGTTGG AACGCCGACA GTAACGAATG ATTTAAGCGA AAACATAATC
CTCACTAGCC TTGAAGATCT TCACAACTGG GCAAGATTAA GTAGTCTTTG GCCTCTTCTT
TATGGAACTG CTTGTTGTTT TATTGAATTT GCAGCTCTAA TTGGATCGAG ATTTGATTTT
GACAGATTTG GATTAGTACC TAGAAGTTCT CCTAGACAAG CAGATCTATT AATTGTGGCA
GGCACTGTCA CAATGAAAAT GGCACCTGCT CTTGTAAGGC TTTATGAGCA AATGCCAGAT
CCCAAGTACG TAATTGCTAT GGGAGCTTGC ACCATTACCG GTGGAATGTT CAGCGCAGAC
TCCACCACGG CAGTCAGGGG AGTTGATAAA TTAATACCTG TTGATCTTTA CCTTCCTGGA
TGTCCACCAA GACCTGAAGC AATATTTGAT GCTGTCATTA AATTAAGAAA AAAAGTTGCA
AACGAATCAA TCTCAGAAAG ATCAAAAATT ACCCAAACTC ATCGTTATTT AACTATCCCT
CATAAAATGA AGCGAGTCGA GGCAAAAGTA AATGGACAAT ACCTAAAGGC AAAAACTCAA
TTAATTGCTT TGAATCCTTC ACTATCTGAA GAGTTTGATC AATCTTTAAA AGAGGTTCAA
AAAATATCTG AAGAACTTTC AAGTAATTAA
|
|---|
| Protein sequence | MELNPLKKSP SSEAVRNLRE ASCGPVGTPT VTNDLSENII LTSLEDLHNW ARLSSLWPLL
YGTACCFIEF AALIGSRFDF DRFGLVPRSS PRQADLLIVA GTVTMKMAPA LVRLYEQMPD
PKYVIAMGAC TITGGMFSAD STTAVRGVDK LIPVDLYLPG CPPRPEAIFD AVIKLRKKVA
NESISERSKI TQTHRYLTIP HKMKRVEAKV NGQYLKAKTQ LIALNPSLSE EFDQSLKEVQ
KISEELSSN
|
|---|
| |