Gene NATL1_03501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_03501 
Symboltgt 
ID4781249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp323737 
End bp324867 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content39% 
IMG OID640083617 
ProducttRNA-guanine transglycosylase 
Protein accessionYP_001014179 
Protein GI124025063 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAGC CCTTATTCGA TTTCCAAATA AAAAGTAGAT GCAAAACGAC ATTAGCTCGT 
GTCTGTTCTT TTAAAACTCC AAATGGAATT GTAAATACTC CAAAATTCAT GCCTGTTGGG
ACTTTAGGAA CAGTCAAAGG AGTTACATCT CAGCAACTTG AGAAAACAGG GGCTGAAATG
ATTCTTGCAA ATACTTTTCA TCTTCATCTT CAACCAGGAG AAAAAATAGT TCAAGATGCA
GGGGGACTAC ATAAATTTAT GAGTTGGAAT AAACCAATTC TTACTGACTC AGGAGGCTTT
CAAGTATTTA GTTTGGCAAA ATTAAATAAA ATAGATGATC AAGGAGTCTC GTTTCAAAGT
CCAAGAGATG GTAAACATAT CTATTTAACT CCTGAAAAAG CTATTGAAAT TCAAATGGCT
TTAGGGTCAG ATGTGGCAAT GGCTTTTGAT CAATGTCCCC CTTACCCAGC AAGCGAATCA
GACGTTGAGG AGGCTTGCAA GAGAACCCAT CATTGGTTGG AGAGATGTTT AAATGCTCAT
AAGAAAAATG ATCAAGCAGT TTTTGGAATA GTTCAAGGTG GTTGCTTCCC TCATTTAAGG
GAATTGAGTG CAAAAATTGT CTCAGGATTT GGTTTGCCAG GGATTGCTAT TGGAGGAGTA
AGCGTAGGTG AACCCATAAA TCAAATGCAC AAAATCGTAC GAGAAACCTG TCCTTTATTA
CCTCAAGATC GACCTAGATA CTTAATGGGA ATTGGAACCT TAAAAGAAAT GGCCATTGCA
GTTGCAAATG GAGTTGACAT GTTCGATTGT GTAATTCCTA CGCGGCTGGG AAGGCATGGA
AGCGCATTAG TTAATGGAGA GACATGGAAT CTAAGGAATT CACGTTTTAA AGACGATTAC
AGCCCATTAG ACTCAACATG TACTTGTGAA GCTTGTACGG GATATTCAAG GGCATATATT
CATCATTTAA TTCGCAATAA AGAATTACTA GGTCTTACAC TTTTGAGTAT GCACAATCTT
ACTCATTTGA TACGTTTTAC AGGTGCTATG AGGCAAGCAA TTACTGAAGG TTGTTTTTCA
GAGGATTTCG CTCCGTGGCA GAGTGACTCT AAAGCGCGTC ATACGTGGTA G
 
Protein sequence
MKKPLFDFQI KSRCKTTLAR VCSFKTPNGI VNTPKFMPVG TLGTVKGVTS QQLEKTGAEM 
ILANTFHLHL QPGEKIVQDA GGLHKFMSWN KPILTDSGGF QVFSLAKLNK IDDQGVSFQS
PRDGKHIYLT PEKAIEIQMA LGSDVAMAFD QCPPYPASES DVEEACKRTH HWLERCLNAH
KKNDQAVFGI VQGGCFPHLR ELSAKIVSGF GLPGIAIGGV SVGEPINQMH KIVRETCPLL
PQDRPRYLMG IGTLKEMAIA VANGVDMFDC VIPTRLGRHG SALVNGETWN LRNSRFKDDY
SPLDSTCTCE ACTGYSRAYI HHLIRNKELL GLTLLSMHNL THLIRFTGAM RQAITEGCFS
EDFAPWQSDS KARHTW