Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_03361 |
Symbol | glyA |
ID | 4779415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 310495 |
End bp | 311730 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640083602 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001014165 |
Protein GI | 124025049 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.498926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATGTG ATCCAAGTAT TGCGAAATTA ATAAACAATG AATTATCAAG ACAAGAAACT CATTTAGAGC TTATCGCAAG TGAGAATTTT GCCTCTAAGG CCGTAATGGA AGCCCAAGGA TCAGTCCTAA CAAATAAATA TGCTGAAGGT CTCCCTAACA AACGCTATTA CGGAGGATGT GAGTATATCG ACGGAATTGA GCAACTAGCA ATAGATAGAG CAAAAAACCT TTTTGGGGCC AACTGGGCAA ACGTCCAACC TCACAGCGGA GCTCAAGCTA ACTTTGCAGT TTTCCTTAGC CTTCTAAAGC CGGGGGACAC AATTATGGGA ATGGACTTAT CTCATGGAGG TCACCTCACT CATGGTTCAC CTGTAAATGT AAGCGGCAAA TGGTTTAAAA CTTGCCATTA CGAAGTTGAT AAAAAGACTG AAATGCTCGA TATGGATGCA ATAAGAAAAA AAGCAATTGA AAATCAACCT AAATTGATTA TCTGTGGATT CTCTGCCTAT CCTCGAAAAA TTGACTTCAA AGCTTTCAGA TCAATAGCTG ATGAGGTAAA TGCTTATTTA TTAGCTGATA TTGCTCATAT TGCTGGTTTA GTAGCAAGTG GACTTCACCC AAGTCCAATC CCATATTGTG ATGTAGTTAC AACAACCACT CACAAAACTC TTAGAGGGCC AAGGGGTGGA CTAATCCTCT CAAAAGATGA GGAGATAGGA AAAAAACTTG ATAAAGCAGT ATTTCCTGGC ACCCAAGGAG GTCCTTTAGA ACATGTAATC GCAGCCAAGG CTGTTGCATT CCAAGAAGCT TCTGCACCCG AATTCAAGAT TTATAGCCAA AAAGTAATCT CAAATGCACA AGTTCTTTCT AATCAACTTC AAAAAAGAGG AATTTCAATT GTAAGCAAAG GAACTGACAA TCATATAGTT CTTCTTGACC TTAGAAGCAT TGGTATGACA GGTAAAGTTG CTGATCAATT AGTAAGTGAT ATTAAAATAA CCGCGAACAA AAACACTGTA CCTTTTGACC CCGAGTCCCC ATTTGTTACT AGTGGCCTAA GGCTAGGTTC AGCAGCCCTT ACGACTAGAG GTTTTAATGA ACAAGCCTTT GAAGATGTTG GTAATATCAT TGCAGATAGA CTACTTAACC CTAACGATGA AGATATAAAG GAAAATTCAA TCAATAAAGT ATCTGAACTT TGCAATAAGT TTCCTTTATA TAGTGAAAAC ATCTAA
|
Protein sequence | MKCDPSIAKL INNELSRQET HLELIASENF ASKAVMEAQG SVLTNKYAEG LPNKRYYGGC EYIDGIEQLA IDRAKNLFGA NWANVQPHSG AQANFAVFLS LLKPGDTIMG MDLSHGGHLT HGSPVNVSGK WFKTCHYEVD KKTEMLDMDA IRKKAIENQP KLIICGFSAY PRKIDFKAFR SIADEVNAYL LADIAHIAGL VASGLHPSPI PYCDVVTTTT HKTLRGPRGG LILSKDEEIG KKLDKAVFPG TQGGPLEHVI AAKAVAFQEA SAPEFKIYSQ KVISNAQVLS NQLQKRGISI VSKGTDNHIV LLDLRSIGMT GKVADQLVSD IKITANKNTV PFDPESPFVT SGLRLGSAAL TTRGFNEQAF EDVGNIIADR LLNPNDEDIK ENSINKVSEL CNKFPLYSEN I
|
| |