| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_02901 |
|---|
| Symbol | |
|---|
| ID | 4780046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 268204 |
|---|
| End bp | 269196 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640083555 |
|---|
| Product | putative sodium-dependent bicarbonate transporter |
|---|
| Protein accession | YP_001014119 |
|---|
| Protein GI | 124025003 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3329] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.28305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACAAA ACCTTTTCAT ACAAAATGCT TTAAGTCCGC CAATACTTTT TTTCTTTTTG
GGTGCAATTG CATACGCATT AAAGTCTGAT TTCGAGATTC CAGCTCCTCT ACCAAAATTA
TTTTCTTTAT ATCTTTTACT TGCAATAGGC TTCAGAGGAG GAATTGAACT TCAAAGAAGT
GGCTTTAGTT ATCCAGTTCT TCCAACTGTG GTTGCTGCAA TATTAATGTC TCTTTTAATC
CCTCTAATTT GCTTTTTAAT ACTGAGATTA AAATTTGATG TTTTTAATGC AGCAGCAATA
TCTGCAGCAT ATGGATCAAT AAGTGCCGTT ACTTTTATAA CCGCTGAAAG CTTTTTAGAA
AGTCAAAATA TACCCTTTGA TGGTTTTATG GTTGCAGCTT TAGCACTGAT GGAGTCTCCA
GCAATAATAA TTGGTCTTCT ATTAGTCAAG TTTGGAGCAA CAAAAAATAG GCCCATAAAA
AGAAAAATGA AATGGGGCTC AATTCTTCAT GAGTCAATGC TCAATGGTTC AGTTTATTTA
TTACTGGGAA GCCTATTAAT AGGTTTTTTG ACATCAGCTG TTGATCCCTC TGACATTAAA
AAGATGGAAC CATTTACTGG AGAACTTTTT TATGGGGCTG AGTGTTTCTT TTTACTAGAT
ATGGGAATTG TGGCAGCTCA ACGGCTCGCT CGTTTAAATA AAACCGGTGC TTTTCTCATT
ATGTTTTCGA TACTGATGCC AATAGTTAAT GCAGTATTAG GTTCAGTAGT AGCAAGATTC
CTAAATTTAG ATCCAGGAAA TGCACTCTTG TTTGTTGTTC TATGTGCAAG TGCTTCATAT
CTAGCTGTAC CAACAGCAAT GAGAATGACA GTGCCTGAAG CTAGGCCCAG TTATTACATT
TCAACTACTC TTGGGTTAAC CTTTCCTTTT AACATAATTT TTGGGATACC AGTTTATATG
AGCTTAGTAA ACACAATGAT TCCTCAAATT TAA
|
|---|
| Protein sequence | MGQNLFIQNA LSPPILFFFL GAIAYALKSD FEIPAPLPKL FSLYLLLAIG FRGGIELQRS
GFSYPVLPTV VAAILMSLLI PLICFLILRL KFDVFNAAAI SAAYGSISAV TFITAESFLE
SQNIPFDGFM VAALALMESP AIIIGLLLVK FGATKNRPIK RKMKWGSILH ESMLNGSVYL
LLGSLLIGFL TSAVDPSDIK KMEPFTGELF YGAECFFLLD MGIVAAQRLA RLNKTGAFLI
MFSILMPIVN AVLGSVVARF LNLDPGNALL FVVLCASASY LAVPTAMRMT VPEARPSYYI
STTLGLTFPF NIIFGIPVYM SLVNTMIPQI
|
|---|
| |