Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_02791 |
Symbol | rplA |
ID | 4779143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 258078 |
End bp | 258785 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640083544 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_001014108 |
Protein GI | 124024992 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.475982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAATT TTTCTAAAAG GATGACAACG TTACTTTCCA AAGTGGAAGA GCGTTCATAT TCTCCAATTG AAGCTATAAA GCTAGTCAAG GAGAATGCCA ATGCAAAATT CGATGAGACT ATTGAAGCTC ATATAAGACT CGGTATTGAC CCAAAATATA CTGATCAGCA ACTAAGGACA ACAGTTGCCT TGCCAAGTGG GACCGGTCAG AAAATACGAA TAGCGGTTGT AACACGCGGC GAAAAAGTGA ATGAAGCAAC TAAAGCAGGC GCTGATCTGG CTGGAGAGGA AGATTTAGTT GATTCAATCA ACAAAGGAGA AATGAACTTT GACCTTCTAA TTTCAACTCC AGATATGATG CCTAAGGTAG CCAAACTTGG TAGAGTGCTT GGTCCTAGAG GGCTTATGCC TAATCCAAAA GCAGGAACAG TTACGACCGA TTTAGAAGGA GCTATTAAAG AATTTAAAGC AGGAAAACTT GAATTCAGAG CAGACAAAGC AGGAATTGTT CACGTTCGAT TTGGTAAAGC AAGTTTTTCA GAAGAGGCAC TCCTTGAAAA TCTGAAGACG CTGCAAACAA CAATAGAAAA AAATAAACCA AGCGGTGCAA AAGGTAAATT TTGGAGAAGC TTCTTTATCA CATCTACAAT GGGACCATCA GTAGAAGTAG ATATAAACGA ATTACAAGAC TTGCAGAAAG AAAAGTGA
|
Protein sequence | MKNFSKRMTT LLSKVEERSY SPIEAIKLVK ENANAKFDET IEAHIRLGID PKYTDQQLRT TVALPSGTGQ KIRIAVVTRG EKVNEATKAG ADLAGEEDLV DSINKGEMNF DLLISTPDMM PKVAKLGRVL GPRGLMPNPK AGTVTTDLEG AIKEFKAGKL EFRADKAGIV HVRFGKASFS EEALLENLKT LQTTIEKNKP SGAKGKFWRS FFITSTMGPS VEVDINELQD LQKEK
|
| |