Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_02701 |
Symbol | rbgA |
ID | 4779904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 249615 |
End bp | 250478 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640083535 |
Product | ribosomal biogenesis GTPase |
Protein accession | YP_001014099 |
Protein GI | 124024983 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0776649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAAAC AAATAATACA ATGGTATCCA GGGCATATTG CTAAAGCAGA AAAACAATTA AAAGAGAATC TGAGAAAAGT TGATCTAGTT TTCGAAGTGC GAGACGCAAG AATACCCCTT GCCACTTCTC ATCCATATCT CCAAAAATGG TTAAAAGGAA AGAAGCAAAT ATTAGTTCTC AATAGAAAAG ACATGATCAA TATTGATGCC TATCAAGCAT GGGATAAAAA ATTAAGATCT GAGGGGAAAG TACCATGGTG GTGTGATGCA AAAGCTGGAA CAGGCGTTCT CCAAATAAAA AATGCCGCTA TTCGTGCTGG GCAAGAGTTA AATCAAAGGC GTCTTGACAG AGGGATGAAA AATCGAGCAA TTAGAGTTCT AACTCTTGGT TTCCCAAATG TGGGAAAATC TGCTCTCATT AACAGACTAG TTAAAAAAAA GGTTGTATCT AGCTCAAGAA AACCAGGGGT TACTAGAAGT TTGAGATGGG TAAGATTGGG ACAAGATCTA GATTTATTGG ATGCTCCTGG CGTTCTGCCG CCTAGATTCG AAGATCAAAA TGCCGCATTA AAACTGGCTA TTTGTGATGA TATTGGTCAA GCAGCATACG ATACTGAACA GGTAGCCATT AGCTTCATGA AACTTCTTGA GACATTAGAA AACATCCAAG AAGCGGGTAT CAAGTCAATG TGTCTTCAAA ATAGATATGG AATATTTGTC AATGAAACCA TTAAAGACAA ATATTCATGG CTACTTTCAG CAGCAGAACG TCACACCTCC GGAGATACTC AAAGAATGTC TCAAAGATTA CTTGATGATT TTCGCAAAAA TTTGTTGGGA AATATCTCTC TTGAACTCCC CTAA
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Protein sequence | MNKQIIQWYP GHIAKAEKQL KENLRKVDLV FEVRDARIPL ATSHPYLQKW LKGKKQILVL NRKDMINIDA YQAWDKKLRS EGKVPWWCDA KAGTGVLQIK NAAIRAGQEL NQRRLDRGMK NRAIRVLTLG FPNVGKSALI NRLVKKKVVS SSRKPGVTRS LRWVRLGQDL DLLDAPGVLP PRFEDQNAAL KLAICDDIGQ AAYDTEQVAI SFMKLLETLE NIQEAGIKSM CLQNRYGIFV NETIKDKYSW LLSAAERHTS GDTQRMSQRL LDDFRKNLLG NISLELP
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