| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_02521 |
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| Symbol | menF |
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| ID | 4779310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 232843 |
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| End bp | 234243 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640083517 |
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| Product | isochorismate synthase |
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| Protein accession | YP_001014081 |
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| Protein GI | 124024965 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTAG AACCCGTCTT TAGTGAGCTT TTAGTTAGTT CTCTTCAGAA ATGGAGTGTA
AGAAAAGTTG ATGAATGTAT CTTGAGCATT TCTGTTCCTG TAAGTCAAAC AGATCCTTTA
ACGACATTAC CTTTAATTGC TGAAAAACAT CAGTTTAGAT TTCTTTGGGA TCTCTCTCCC
GGATTGTGCC TTTCTGCCGG AGGTCATTGT CAATCTTTGG ATTTATCTGG ACCAAAGAGG
TTTGAAAATG CACAAAGATT TAGTGATGAG ATTTTTACTC GATTAATAGA AATTTCTCCA
AGTCCAGCAT TTTCAGCCTC AAGGATTTTA TTTTCATTTT CTTTCTTTGA TCAAATTAAA
AGTAATGAAA AATCAATAGA TGATAAATTT TCCCTACAGG CTGTTTTGCC TAAGTGGCAA
TTAACCGCAA AAGATGGATT AACATGGTTA CGTTTAAATT CAGTTGCCCA AAATCCTTCA
GATGTTCGTG AAGCCATAGA AAGATTATGG TCAATTCGAG AAAAGATAAA TAAATCACCA
GTCCGAATTG TCAATGATGA AAAAGAAAAT TTCTTAGTCG ATAATTTCTC AGATGATTGG
AAATCGCAAT ATCGAGATGC GTTGGCTAAA GGGATCGAAT TAATAAATGC AGGTGATTTG
GATAAACTTG TATTGGCTAC GAGACAACAT CTCTCCCTAA GAAAACCATT AGATCCACTG
CATTTACTTG CTCGTTTAAG AGTTCAGCAA ACTAATAGTT GTCGATTCCT ATGGCAAAAA
AATCATGATG AGTCATTTTT TGGTGCATCG CCTGAAAGAT TGATAAGTCT CAATCAAAAT
CAGTTATTAA TCGATGCTTT AGCTGGTACT GCAAAAAAAG GTGATGATGG GAGAGAATTG
CTTGCTTCCT CTAAAGATTT AAGAGAACAC CATTTTGTAG TTAATTCTAT TGTCGAACAA
CTTTTAAAAA GAGGTATTAA AGCAAGTTAT CCATCTCAAC CAAAATTAAT GACTCAAGAC
CATTTAATTC ATTTGCATAC TCTTATTCAA GCCTCTGTTA AAGAGAAATC TCCTCTTGAT
TTAGTTGAAG CACTTCATCC AACCCCTGCT GTTGCAGGAT TACCTCTGAA TAAATCTTTG
AGTTGGTTGA GAGCTTTAGA ACCATTTGAC CGTAAAACAT ATGCTTCTCC AATTGGGTGG
ATAGATAAAA ATCAAAATTC AGAATTTAGG GTTGCCATAC GTTATGGACA GCTTAAAGCT
AATGAACTTA AATTATTTGC TGGCGCTGGT TTAGTAAAAG GTTCAACTGT TGAGGGGGAA
ATGCAAGAAG TAGCTTTGAA ATTTGAAGTT TTAAGAAATC AATTAAATTT AGATAGAGTT
AATTGTTCAA ATGATCTATA A
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| Protein sequence | MNLEPVFSEL LVSSLQKWSV RKVDECILSI SVPVSQTDPL TTLPLIAEKH QFRFLWDLSP
GLCLSAGGHC QSLDLSGPKR FENAQRFSDE IFTRLIEISP SPAFSASRIL FSFSFFDQIK
SNEKSIDDKF SLQAVLPKWQ LTAKDGLTWL RLNSVAQNPS DVREAIERLW SIREKINKSP
VRIVNDEKEN FLVDNFSDDW KSQYRDALAK GIELINAGDL DKLVLATRQH LSLRKPLDPL
HLLARLRVQQ TNSCRFLWQK NHDESFFGAS PERLISLNQN QLLIDALAGT AKKGDDGREL
LASSKDLREH HFVVNSIVEQ LLKRGIKASY PSQPKLMTQD HLIHLHTLIQ ASVKEKSPLD
LVEALHPTPA VAGLPLNKSL SWLRALEPFD RKTYASPIGW IDKNQNSEFR VAIRYGQLKA
NELKLFAGAG LVKGSTVEGE MQEVALKFEV LRNQLNLDRV NCSNDL
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