Gene NATL1_02241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_02241 
Symbol 
ID4779261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp209881 
End bp211059 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content37% 
IMG OID640083489 
Productputative sugar-phosphate nucleotidyl transferase 
Protein accessionYP_001014053 
Protein GI124024937 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA TGATCCTAGC TGCTGGGAAA GGAACCCGAG TTCAGCCGAT CACGCATGTG 
ATTCCAAAGC CAATGATTCC TATCCTTCAG AAACCTGTAA TGGAGTTTCT GTTGGAACTC
CTTAAGGAGC ATGGTTTTAC TGAGGTTATG GTCAATGTTT CCCATTTAGC AGAAGAAATA
GAAAATTATT TTCGAGATGG ACAAAGATTT GGAGTTGAAA TTGCATACAG CTTTGAAGGT
CGTATTGAAG ACGGAGAATT AATTGGGGAT GCACTTGGAT CAGCGGGCGG TCTGAAAAAA
ATTCAAGATT TTCAAAAGTT TTTTGATGAT ACTTTTGTCG TCCTCTGTGG AGATGCACTC
ATTGATTTGG ATTTATCTGA AGCAGTAAAA CGACATAAAG AAAAAGGTGC TTTGGCTAGT
TTGATTACTA AACGTGTCTC AAAAGATCAA GTAAGTAGTT ATGGCGTTGT TGTAACTGAT
GAAGAAGATC GAGTTAAAGC TTTTCAAGAA AAACCTTCTA TAGATAATGC GCTAGGCGAT
ACGATTAATA CTGGAATTTA TTTATTTGAG CCAGAGATTT TTAATTATAT TCCATCTGGA
AAACCCTTTG ATATTGGCTC AGATTTGTTT CCAAAACTAG TAGAGGAAGG AGCACCTTTC
TATGCCTTAC CGATGGATTT TGAGTGGGTT GATATTGGTA AAGTACCAGA TTATTGGAGA
GCAATCAGGA ATGTACTTAA AGGTGATGTT AGACAGGTTG AAATTCCAGG AAAGCAAGTA
AGACCAGGAA TCTATACAGG TTTAAATGTT GCAGCTAATT GGGATAAAAT AAATGTTAAA
GGACCTATAT ATGTTGGTGG AATGACAAGG ATTGAAGATG GTGTAACTAT CGTTGGTCCT
TCTATGATTG GTCCGAGTTG TTGTATTTGT GAAGGTGCAA CAATTGATAA TTCAATAATC
TTTGATTATT CATTAATTGG GCCAGGAGTT CAACTTGTGG AGAAGTTAGT CTTTGGTAGA
TATTGTGTTG GTAAAGAAGG GGATCACTTT GATTTACAGG AAGCTGCTTT GGATTGGTTA
ATAACTGATG CTAGAAGACA GGACTTAGGT GAACCGTCAC CTCAACAAAA AGCAATGGCT
GAATTATTAG GTACAGATCT GATTGGTTCT TCTAATTAA
 
Protein sequence
MKAMILAAGK GTRVQPITHV IPKPMIPILQ KPVMEFLLEL LKEHGFTEVM VNVSHLAEEI 
ENYFRDGQRF GVEIAYSFEG RIEDGELIGD ALGSAGGLKK IQDFQKFFDD TFVVLCGDAL
IDLDLSEAVK RHKEKGALAS LITKRVSKDQ VSSYGVVVTD EEDRVKAFQE KPSIDNALGD
TINTGIYLFE PEIFNYIPSG KPFDIGSDLF PKLVEEGAPF YALPMDFEWV DIGKVPDYWR
AIRNVLKGDV RQVEIPGKQV RPGIYTGLNV AANWDKINVK GPIYVGGMTR IEDGVTIVGP
SMIGPSCCIC EGATIDNSII FDYSLIGPGV QLVEKLVFGR YCVGKEGDHF DLQEAALDWL
ITDARRQDLG EPSPQQKAMA ELLGTDLIGS SN