Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_02061 |
Symbol | |
ID | 4780645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 192311 |
End bp | 193057 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640083471 |
Product | two-component response regulator |
Protein accession | YP_001014035 |
Protein GI | 124024919 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.540525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCA CAAGTCCCTC AAAGGAAACC ATCCTCGTAG CTGATGATGA GGCAAGCATT AGGAGGATTC TAGAAACTCG CCTATCCATG ATTGGCTATC AGGTAGTTAC TGCTTGTGAT GGAAATGAGG CTTTGGATCT TTTCAGGAAT TGTGAGCCTG ATTTGGTGGT ACTCGATGTC ATGATGCCTA AATTAGATGG ATATGGAGTT TGCCAGGAAC TAAGAAAGGA ATCAGATGTT CCAATAGTTA TGCTGACAGC CTTGGGAGAT GTTGCAGATA GAATTACAGG ACTAGAGCTA GGTGCTGATG ATTATGTTGT TAAACCATTT AGCCCAAAAG AATTAGAAGC TAGGATCAGA TGTTTATTAA GAAGGGTAGA GAAAGAACAA ATAGCAGGAC TGCCTAATTC AGGTGTCATT GCGGTTATGA ATTTAAAGAT TGATACAAAT AAGCGTCAGG TTTATAGAAA CGATGAACGA ATTCGATTAA CAGGTATGGA ATTTAGTCTT TTAGAACTGT TGGTTAGTCG TTCAGGAGAA CCTTTTAGTC GAGGTGAGAT TCTTAAAGAA GTTTGGGGAT ATACACCTGA AAGACATGTT GATACGAGAG TAGTGGATGT TCATATTTCT AGACTTAGAT CAAAACTTGA GGATGATCCT GCAAATCCAG AACTAATACT GACTGCAAGA GGAACAGGTT ATCTTTTTCA AAGAATTGTT GACTCTATGA TTCCTGAAGG ATCATAA
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Protein sequence | MTATSPSKET ILVADDEASI RRILETRLSM IGYQVVTACD GNEALDLFRN CEPDLVVLDV MMPKLDGYGV CQELRKESDV PIVMLTALGD VADRITGLEL GADDYVVKPF SPKELEARIR CLLRRVEKEQ IAGLPNSGVI AVMNLKIDTN KRQVYRNDER IRLTGMEFSL LELLVSRSGE PFSRGEILKE VWGYTPERHV DTRVVDVHIS RLRSKLEDDP ANPELILTAR GTGYLFQRIV DSMIPEGS
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