Gene NATL1_01791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_01791 
SymbolaroK 
ID4779632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp170834 
End bp171430 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content36% 
IMG OID640083443 
Productshikimate kinase 
Protein accessionYP_001014008 
Protein GI124024892 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0539701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCC AATCAACCCC TAAAACTCTT AAAGAAAAGT TAGGTGGTCG AAATATATTT 
TTGATAGGAA TGATGGGTTC TGGCAAAAGT CAAACGGGTC CAGTTCTAGC AAAAATGATC
AATTATGCTT TTGTTGATAC TGATGATGTT ATAGAAAAAG CGTCTAAACA ATCTATTTCA
TCTATTTTTG AAAAAGATGG AGAAAAAGTC TTTAGGGATG TTGAAAAAAA AGTTTTAAAA
GAAATTAGTC AACATCATTC TCTTGTAATT GCTACCGGAG GGGGTTTAGT TACCTTGCCT
GAAAACTGGG GCATTCTTCA TCAAGGAATA GTTATTTGGT TAGATCTTGA TTTGAGACGT
TCAATTAAAC GATTAGAAAG TGATCAAAAG AGACGCCCTT TACTACTTGG GGATAATTTA
GCTGAGAATT TTAGTCAGAT TTATGAAAGT AGAAAACCAA TATATTTAGA GTCAGATTTG
AGAATAGAAG TTGAGGATCA ATCACCATAT GAGGTCGCTA CTATGGTTGC TGAACATTTG
CCAAGCATCC TTATTGACCC GGAGACTCAA GCCGAACGGC ATACCACTGA ATTGTAA
 
Protein sequence
MAVQSTPKTL KEKLGGRNIF LIGMMGSGKS QTGPVLAKMI NYAFVDTDDV IEKASKQSIS 
SIFEKDGEKV FRDVEKKVLK EISQHHSLVI ATGGGLVTLP ENWGILHQGI VIWLDLDLRR
SIKRLESDQK RRPLLLGDNL AENFSQIYES RKPIYLESDL RIEVEDQSPY EVATMVAEHL
PSILIDPETQ AERHTTEL