| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_00371 |
|---|
| Symbol | dcm |
|---|
| ID | 4780087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 39055 |
|---|
| End bp | 39972 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640083300 |
|---|
| Product | site-specific DNA methylase |
|---|
| Protein accession | YP_001013866 |
|---|
| Protein GI | 124024750 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATA ATTTTAGATT TATTGATCTT TTTGCTGGTA TCGGAGGCAT AAGAATACCT
TTTGAAGAAT TAGGCGGAGA ATGTGTTTTT TCTTCTGAAT GGGATAAATA TTCACAAATT
ACCTATGAAG CAAATTTTGG TGAAATACCT AAAGGAGATA TAACAAAAAT TAATGCTGAA
GATATTCCAA AACATGATTT ACTTGTAGGT GGTTTTCCTT GCCAAGCATT TTCTCAAGCA
GGATTAAAAA AAGGTTTTCA AGATACAAGA GGAACTTTAT TCTTTGATAT TGCTCGTATT
CTTAAATTCC ATAAACCAAA AGCGTTTTTA TTAGAAAATG TTAAACATTT AAAAGGTCAT
GATAGTGGTA AAACATTTAA AACAATTATG AATGTTTTAA GGGATATTGG TTATCAAACA
ATTGAATATA AAGTTCTTAA CGCAAAGGAT TTTGGTGTTC CCCAGAATCG AGAAAGAATT
TTTATTTTTG GTTATATTGA TTTTATATTT TTCGAATTTC CTGAACCGAG TAAAGTTCAA
ACAAAGGTTG GCGATATCTT AGATGATAAT GTTCCGGATA AATTTACTCT CTCAGATAAG
ATGTGGACTA ACGCAATAAG GAGAAAAGAA AATAATAGAA AAAGAGGTTA TGGATTCGGT
TTTTCATTGT TCGATAAAGA CTCTGAATAT ACCAGTACTA TTTCAGCAAG ATACTACAAG
GACGGTTCAG AGATTTGGAT AGATCAAGAT TCAAAAAATC CAAGAATGCT TACACCAAAT
GAAGCACGTA AACTGCAAGG TTTTCCTGAA GGTTTTAAGA TTCCCGTTAG TAATTTGCAG
GCATATAAGC AATTTGGTAA TTCAGTATCT GTGCCAGTAA TTCGCGCTAT TGCAGAGAGA
ATAGTTAAAT TGCTTTAG
|
|---|
| Protein sequence | MSNNFRFIDL FAGIGGIRIP FEELGGECVF SSEWDKYSQI TYEANFGEIP KGDITKINAE
DIPKHDLLVG GFPCQAFSQA GLKKGFQDTR GTLFFDIARI LKFHKPKAFL LENVKHLKGH
DSGKTFKTIM NVLRDIGYQT IEYKVLNAKD FGVPQNRERI FIFGYIDFIF FEFPEPSKVQ
TKVGDILDDN VPDKFTLSDK MWTNAIRRKE NNRKRGYGFG FSLFDKDSEY TSTISARYYK
DGSEIWIDQD SKNPRMLTPN EARKLQGFPE GFKIPVSNLQ AYKQFGNSVS VPVIRAIAER
IVKLL
|
|---|
| |