Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5959 |
Symbol | |
ID | 4643661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 6360079 |
End bp | 6360936 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639809429 |
Product | integrase catalytic subunit |
Protein accession | YP_956723 |
Protein GI | 120406894 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.637785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAAGAGC TCGCCGCCGA CGGGATCCCC GTCGCGGTGA CGTGCCGGGT ACTCAAGCTC TCCCGCCAAC CGTATTACCG CTGGTTGGCC GACCCCGTCA CCGACGCCGA ACTCGTCGAG GCCTACCGCA CCAATGCGCT GGTCAACGCG CACGCAGACG ATCCGGAGTT CGGCTACCGC TACCTCGTGG AAGAGGCCCG CGAGGCCGGC GAACCGATGG CCGAGCGCAC CGCCTGGCGA ATCTGCTCGC AGAACCGACT GTGGAGCGTG TTCGGCAAAA AGCGCGGCAA GAGCGGCAAA GTCGGGCCGC CGGTGCACGA CGATCTTGTC CAGCGCGACT TCACCGCTGA TGCCCCAAAT CAGTTGTGGC TCAGTGACAT CACCGAACAT CGCACCGATG AAGGCAAACT CTATCTCTGC GCGATCAAGG ATGTCTTCTC CAACCGGATC GTCGGGTACT CGATCGACTC CCGGATGAAG TCCCGGCTCG CCACGCGGGC CCTGCACAGC GCGGTGGCCC GTCGCGGTGA TGTCGCCGGA TGCATAGTCC ACACCGACCG TGGATCTCAA TTCAGGTCAA GGAGATTCGT CCACGCACTC GGCCACTACG AGATGGTCGG ATCGATGGGC CGCGTCGGGG CCGCCGGCGA CAATGCCGCC ATGGAGAGCT TCTTCAGCCT GCTGCAGAAG AACGTTCTGG ATCGTCGTCG CTGGGCGACC CGGGAAGAGC TGCGGATCGC GATCGTCACC TGGATCGAAC GGACCTATCA TCGCCGCCGA CGCCAGTCCG GTCTCGGGCG GTTGACCCCG ATCGAATTCG AAGCAATCAT GACCACACCG GCCAGTCAGG CCGCGTGA
|
Protein sequence | MKELAADGIP VAVTCRVLKL SRQPYYRWLA DPVTDAELVE AYRTNALVNA HADDPEFGYR YLVEEAREAG EPMAERTAWR ICSQNRLWSV FGKKRGKSGK VGPPVHDDLV QRDFTADAPN QLWLSDITEH RTDEGKLYLC AIKDVFSNRI VGYSIDSRMK SRLATRALHS AVARRGDVAG CIVHTDRGSQ FRSRRFVHAL GHYEMVGSMG RVGAAGDNAA MESFFSLLQK NVLDRRRWAT REELRIAIVT WIERTYHRRR RQSGLGRLTP IEFEAIMTTP ASQAA
|
| |