Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5912 |
Symbol | |
ID | 4647523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 6297831 |
End bp | 6299255 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639809388 |
Product | gluconate transporter |
Protein accession | YP_956682 |
Protein GI | 120406853 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | [TIGR00791] gluconate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0993393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAGGCGA TTGACCCGGC ATACGGAACC GGCACACTGC TGCTGATCGC CGCAGGTGCC GTCGCGCTAC TGCTGTTCCT GATCATCAAG GTGAAACTGC ACGCCTTCAT CGCGTTGGTG CTGGTGAGTC TCCTGACGGC ACTGGCCGCA GGGATCCCCG TCGCCGACGT CCCGAGCGCC CTGTCCTTCG GGTTCTCCAA CACGCTCGGC TCGGTGGCGC TGCTCGTCGG GTTCGGTGTG ATGATCGGCA GGCTCCTCGA GATCACGGGT GGCGCACAGG TTCTCGCCGA CACCCTCATC GGCCGGTTCG GCGAAAAGCG GGCGCCGTTC GCTCTCGGCG TCGCGGCGTT GCTGTTCGGT TTCCCGATCT TCTTCGACGC CGGGCTGGTG GTCTTCCTGC CCATCATCAT GACCGTCGCG CGGCGCTTCG GCGGATCGCT TCTGTTGTAC GCGTTCCCCG CCGCCGGCGC CTTCGCGGCC ATGCATGCCC TGGTCCCGCC ACATCCCGGT CCGGTGGCTG CGGCCGAACT GCTCGGCGCC AACATCGGTC TCACCTTGCT CATCGGCGCC CCGGTCGCCG TCGCCTCCTG GTACGTCGGT GCTTTCCTGG TGTCCCAGTT CATCGGCAGA CGGGTGCACG TCGACATTCC GACGTCGCTG TTCGGTGAGA TCAACGGCGG CCGTGACACC GACACCGGCG AAACCTCGGG GGCGGCCACC ACCACGACTG CTACCCGCAC CGCCCCGGCC TTCATCACGG TGCTCGGCGT GCTGCTGCTG CCGTTCGTGT TGATCTCGTT CAACACCGTG GTCGACACCC TCATGACCGC CGGGGTGATC GAGGAGGGCG CGACCTGGGC CGAGTACCTC AAGTTGATCG GCACCACCTC GATCGCGTTG CTGATCACCG TCATCGTGGC GACCCTGGCG CTCGGACTGC GCGGCCGGTC GATGGCCACC GTGACCGACA TCCTCGACCA GGCGCTCGGA CCGATCTGCG CGATCATCCT CATCACCGGC GCCGGCGGAA TGTTCGGCGG CGTGCTGCGG CTCAGCGGCA TCGGCGACGC GCTGAGCGGT TCGCTGTCGA ATCTCGGGAT CTCGCTGATC CTGCAGGCGT TCGTCATCTC CACACTGCTG CGTGTCGCGC AGGGATCGGC GACCGTCGCG CTGACGACGA CCGCCGGCCT GCTCAGTGCG GCGGTCGCCG CGGCCCAGCT GAGCAACCTC CAACTCACAG CGTTGGTGAT GGCGATCGCG GCCGGTGCCA CGGTGCTGTC GCACGTCAAC GACTCCGGGT TCTGGCTGGT CAGCCGGTTC TTCGGCATGG ACGTCAAGAC CACCCTCAAG ACCTGGACCG TGATGGAGAC GACGTTGGGG CTCAGCGCCT TCGCGATCAG CCTCGGGTTG TGGGCCATCG CCTGA
|
Protein sequence | MEAIDPAYGT GTLLLIAAGA VALLLFLIIK VKLHAFIALV LVSLLTALAA GIPVADVPSA LSFGFSNTLG SVALLVGFGV MIGRLLEITG GAQVLADTLI GRFGEKRAPF ALGVAALLFG FPIFFDAGLV VFLPIIMTVA RRFGGSLLLY AFPAAGAFAA MHALVPPHPG PVAAAELLGA NIGLTLLIGA PVAVASWYVG AFLVSQFIGR RVHVDIPTSL FGEINGGRDT DTGETSGAAT TTTATRTAPA FITVLGVLLL PFVLISFNTV VDTLMTAGVI EEGATWAEYL KLIGTTSIAL LITVIVATLA LGLRGRSMAT VTDILDQALG PICAIILITG AGGMFGGVLR LSGIGDALSG SLSNLGISLI LQAFVISTLL RVAQGSATVA LTTTAGLLSA AVAAAQLSNL QLTALVMAIA AGATVLSHVN DSGFWLVSRF FGMDVKTTLK TWTVMETTLG LSAFAISLGL WAIA
|
| |