| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5885 |
|---|
| Symbol | |
|---|
| ID | 4648143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 6269879 |
|---|
| End bp | 6271006 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639809362 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_956656 |
|---|
| Protein GI | 120406827 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.468713 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTCGA CGGAGGCGTT GAATCACGTC ATCTCTGTCG CCGCCGCGAG CGCCGATCAG
GTCGACGCCG AGGGTGCCTA CCCCGCGGCA GCGGTGGACG CGCTGCGTGG CAGCGGTTTG
CTGGGTCTGG TCGTGCCCGA GGAGGCCGGC GGCCTTGGCG CAGGCCCGCA GCAGTTCGTG
GACGTCGTCG GCGGGTTGGC TGCCGCGTGT GGGTCGACCG CGATGGTCTA CCTGATGCAC
ACCGCCGCGG CGGTCACCGT CGCCGCGGCG CCGCCGCCGG GCATGCCGGA GATGTTGTCC
GCCATGGCTT CCGGGAATGC ACTGGGCACG TTGGCGTTCA GCGAGAAGGG CTCACGTTCG
CACTTCTGGG CGCCGGTGTC CACGGCCGCG TTGTCCGACG ACGGTGACAC GGTGAAGCTG
CGGGCCGACA AGAGCTGGGT GACCTCAGCG GGTTACGCCG ACATCTACAT CGTGTCCGCC
GGATCCACCT CCGGAGTCGC CGGCGAGGTG GATCTCTACG CGCTCCCCAG GTCTGGGGAA
GGCCTCTCCG TCGTGGCGCC GTTCGCCGGC ATGGGTCTGC GCGGCAACGC CTCCTCGCCG
ATGACTGTCG ATGCGACGAT CCCAGTTGCG TCCCGACTGG GGGCACAGGC CGCCGGATTC
GGGCTTCTGA TGGAGACGGT CCTGCCGTGG TTCAACCTCG GTAATGCCGC CGTGTCACTG
GGGCTCGCCG GCTCCGCGTA CGTCGCAACC ATCGGGCACG TCAGCGGTGC CCGGCTGGAA
CATCGCGACG AGGCGTTGTC AGCCCTGCCG ACGATTCGCG CGCAGATCGC GAAAATGGGA
ACGACTCTCG CGGCTCAACG GGCCTACCTG CGCAGTGCCG CCGCCAGCGT CAGTGCTCCC
GACGAGGAGA CGCTCAACCA TGTGCTCGGT ATCAAGGCGT CCGCCAACGA CGCCGCGCTG
ACCATCACCG AGTCCGCCAT GCGGGTGTGT GGTGGCGCTG CCTTCTCCAA GCACCTGCCC
ATCGAGCGGA ACTTCAGGGA CGCGCGGGCG GGCGCGGTGA TGGCCCCCAC CGCCGACGTG
CTCTACGACT TCTACGGCAA GGCCGTCACC GGCCTTCCCC TGTTCTGA
|
|---|
| Protein sequence | MYSTEALNHV ISVAAASADQ VDAEGAYPAA AVDALRGSGL LGLVVPEEAG GLGAGPQQFV
DVVGGLAAAC GSTAMVYLMH TAAAVTVAAA PPPGMPEMLS AMASGNALGT LAFSEKGSRS
HFWAPVSTAA LSDDGDTVKL RADKSWVTSA GYADIYIVSA GSTSGVAGEV DLYALPRSGE
GLSVVAPFAG MGLRGNASSP MTVDATIPVA SRLGAQAAGF GLLMETVLPW FNLGNAAVSL
GLAGSAYVAT IGHVSGARLE HRDEALSALP TIRAQIAKMG TTLAAQRAYL RSAAASVSAP
DEETLNHVLG IKASANDAAL TITESAMRVC GGAAFSKHLP IERNFRDARA GAVMAPTADV
LYDFYGKAVT GLPLF
|
|---|
| |