Gene Mvan_5884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5884 
Symbol 
ID4648142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6269043 
End bp6269864 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content66% 
IMG OID639809361 
Producthypothetical protein 
Protein accessionYP_956655 
Protein GI120406826 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.619813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC CACTGATCGT CGGTGCTGTG GCCTACACCC CGAATGTGGT CCCGATTTGG 
GAGGGCATTC GTGAATACTT CGACAGCGCA GGCGAACCCG ATGCCGCCAT GGATTTCGTC
CTCTACTCGA ACTACGGGCG ACTGGTCACC TCGTTGATCG CCGGGCACAT CGATGTCGCG
TGGAATACCA ACCTGGCCTA CGTACGGACG GTGATGCAGA CCGACGGGCA CTGCGTCGCT
CTGGCACAGC GCGACACCGA CGTGGGCTTC ACCACCGTCT TCGTCGCGCC GTCCGGCAGC
GGACTGTCGG GCCCCACGTC GATCGCCGGC AAGCGGCTCG CGCTCGGCTC GGCCGATTCC
GCGCATGCGG CGATCCTGCC ACTGCATTAC CTGACCCGCG CCGGTGTGCC CCCATCGGAT
CTGCAGGTCA TCCGGTTCGA CACAGATATC GGTAAGCACG GCGACACCGG CCGCAGCGAG
CTCGACGCGA TCGAAGCAAT GTTGGCCGGT GAGGTCGACG TCGCCGCGAT CGGCAGCAGC
ACCTGGGAGG CGATGGGGCG CGACGAGCTG ATGGCCGGCA CCCTGGAGGA GGTGTGGCGG
ACCGACGGAT ACTGCCACTG TATGTTCACC GCGCTCGACA CCCTGCCGGC CCAGCGTTAC
ACCCCATGGG TGGACAAGCT GTTGGCGATG GACTGGGACA ACCCTGAGCA CCGCAGAATT
CTGGAACTCG AAGGACTGCG GCGCTGGGTG AGGCCGCACC TGGACGGGTA CGAGCCACTG
TTCGCCGCGG TGGAGGAGCA GGGGGTCGAC CCTCGGTGGT GA
 
Protein sequence
MSDPLIVGAV AYTPNVVPIW EGIREYFDSA GEPDAAMDFV LYSNYGRLVT SLIAGHIDVA 
WNTNLAYVRT VMQTDGHCVA LAQRDTDVGF TTVFVAPSGS GLSGPTSIAG KRLALGSADS
AHAAILPLHY LTRAGVPPSD LQVIRFDTDI GKHGDTGRSE LDAIEAMLAG EVDVAAIGSS
TWEAMGRDEL MAGTLEEVWR TDGYCHCMFT ALDTLPAQRY TPWVDKLLAM DWDNPEHRRI
LELEGLRRWV RPHLDGYEPL FAAVEEQGVD PRW