Gene Mvan_5858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5858 
Symbol 
ID4647378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6244006 
End bp6244662 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID639809334 
Producthypothetical protein 
Protein accessionYP_956629 
Protein GI120406800 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACAGA AGAGAACCGT GGCGGTCGGA GCGGCCGCAG TGGCGGTCGC GGCCGTGATC 
GCGTCGTGTA GCAACACTGC CGGCAACGAG GCAAGCTCGA CGGCCTCGCC CGCCCCCGTT
CAGACCTCGG CCGCGACCCC CGCGGCGTCG CACAACCAGG CCGACATGAT GTTCACCCGC
CACATGATTC CGCACCACCA GCAGGCGATC GAGATGAGCG ACATGATCAT CGCCAAGCAG
GGGATCGATC CGCGGGTGGT CGACCTGGCG GAGCAGATCA AAGCCGCGCA GGGCCCGGAG
ATCGCACAGA TGCAGGGATG GCTCGACGAA TGGGGCATGC CCGGCAACAT GCCGCCGGGC
CATGGAGACA TGCCCGGCGG GCCGATGATG CCCGGAATGC CCGGCATGGA GGGAATGCCC
GGCATGGAGG GAATGATGTC GCCCGCCGAC ATGCAGGCGT TGCAGAACGC CCAGGGGGTG
GAGGCCAGCA AGTTGTTCCT GTCCCAGATG ATCCGGCATC ACGAGGGTGC GATCACCATG
GCCGAGAACG AAATAGAGAA CGGCCAGTCC CCCGACGTGG TCGAGCTGGC CAAGACGATC
GCCAGCAGCC AGCGGACGGA GATCGACACC ATGAACCAGA TCCTCAAGTC GCTGTAG
 
Protein sequence
MRQKRTVAVG AAAVAVAAVI ASCSNTAGNE ASSTASPAPV QTSAATPAAS HNQADMMFTR 
HMIPHHQQAI EMSDMIIAKQ GIDPRVVDLA EQIKAAQGPE IAQMQGWLDE WGMPGNMPPG
HGDMPGGPMM PGMPGMEGMP GMEGMMSPAD MQALQNAQGV EASKLFLSQM IRHHEGAITM
AENEIENGQS PDVVELAKTI ASSQRTEIDT MNQILKSL