Gene Mvan_5780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5780 
Symbol 
ID4645723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6173395 
End bp6173946 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content67% 
IMG OID639809256 
Producthypothetical protein 
Protein accessionYP_956551 
Protein GI120406722 
COG category[S] Function unknown 
COG ID[COG3797] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.776481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCGT CGCGCTATGT GGCGTTGCTG CGGGGCATCA ACGTGGGCGG CCGCAACAAG 
ATCTCGATGC CCGACCTGCG TGCAGTGCTC GAGGACGCCG GTTTCGGCAA CGTGAGCACC
TACATCCAGT CCGGCAACGT CGCGTTCGAA TCCGACGGTG CGCGGGCCTC ACTCGAATCC
GACATCGAGG CCCTGCTCGT GAGGCTTCTG GAGAGCCCGC CGGTCGTGGT CGTGCGCTCA
CACCGCCAGC TGCGCGGCGT CGTCGAGGAC GCCCCCGGCG AATTCGCGGA ACGGCACACC
GAGCACCACC GCGACGTGAT CTTCGTCAAG GCCCCGCTGA CCGTCGAGCG GGCGATGGAG
GTCGTGCAAC TGCGCGACGG TGTCGACGAC GCGTGGCCAG GACCCGGCGT CGTCTACTTC
ACCCGGGTCA TCGCCGAGAA GGCCAGGAGC AGGATGAGCC GCATCGTCGG CACCCCGGAA
TACCGGCTGA TGACGATCAG GAACTGGGCG ACGACGACCC GGATGTTGAC CCTGCTCGAC
GAGATGCGGT GA
 
Protein sequence
MGSSRYVALL RGINVGGRNK ISMPDLRAVL EDAGFGNVST YIQSGNVAFE SDGARASLES 
DIEALLVRLL ESPPVVVVRS HRQLRGVVED APGEFAERHT EHHRDVIFVK APLTVERAME
VVQLRDGVDD AWPGPGVVYF TRVIAEKARS RMSRIVGTPE YRLMTIRNWA TTTRMLTLLD
EMR