Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5729 |
Symbol | |
ID | 4644184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 6118094 |
End bp | 6120265 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639809205 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_956500 |
Protein GI | 120406671 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCCAGA TCGCCGGCTC GTCGCGCACC GCCCTCGCGC TGGAACTCTG GCCGGGCAAG GCCTACCCTC TCGGCGCCAC CTATGACGGC TCCGGAACCA ACTTCGCGCT GTTCAGCGAG GTAGCCGAGA AGGTCGAGCT GTGCCTGTTC AGTGACGACG CAGCCGGAGG GACCGTCGAG ACCCGGGTGA CCCTGCCCGA GGTGGACGGC TTCGTGTGGC ACGGGTTCAT CCCGAACATC GAGCCGGGAC AGCGCTACGG CTACCGGGTG TACGGACCCT ACGACCCCGC CGCCGGGATG CGCTGCAACC CGAACAAACT GCTGCTCGAC CCGTACTCCA AGGCCATCGA CGGCAACTTC GACTGGAACC AGTCGCTGTT CGGCTACAAC TTCGGCGATC CCGACAGCCG CAACGACGAC GACTCGGCCG ACAGCATGCC CAAGTCGGTG GTCATCAACC CGTTCTTCGA CTGGGGCGTC GACCGGCCGC CCAACCACGA GTACGCCGAC ACGGTGATCT ACGAGGCGCA CGTCAAGGGC CTGACCCAGA CGCACCCCGA CATCCCCGAG CAGATCCGCG GCACGTACGC CGCGGTCGCG CATCCGGCGA TCATCGAGCA CCTCACGTCG CTGGGGGTCA ACGCCATCGA GCTGATGCCG GTGCACCACT TCGCGAACGA CTCGACGCTG ATCGACAAGG GCCTGTCCAA CTACTGGGGC TACAACACGA TCGGCTTCCT GGCACCCGAC GCCAAGTACA GCTCCAACCC CAATCCCGGC GGTCAGGTGC AGGAGTTCAA GGCGATGGTG CGCGCGCTGC ACGAGGCGAA CATCGAGGTC ATCCTCGACG TCGTCTACAA CCACACCGCC GAGGGCAACC ACCTCGGCCC GACCTTGTCG ATGCGCGGCA TCGACAACGC CGCGTACTAC CGCCTCGTCG ACGACGACAA GCGCTACTAC ATGGACTACA CGGGCACCGG CAACAGCCTC AACGCCGGAC ATCCACACTC ACTGCAGCTC ATCATGGATT CACTGCGGTA CTGGGTGACC GAGATGCACG TGGACGGATT CCGGTTCGAC CTGGCCTCCA CGCTGGCGCG CGAGTTCTAC GACGTCGACC GGCTGTCCAC CTTCTTCGAA CTCGTCCAGC AGGATCCCAC CGTCAGCCAG GTGAAGCTCA TCGCCGAACC CTGGGACGTC GGGCCCGGCG GCTACCAGGT CGGTAACTTC CCGCCGCAGT GGACGGAATG GAACGGCAAG TACCGCGACA CGGTGCGCGA TTTCTGGCGT GGTGAACCGG CCACGCTCGA CGAATTCGCC TACCGGCTCA CCGGATCGGC CGACCTCTAC GAACACACGG CGCGGCGGCC GGTGGCGTCC ATCAACTTCG TCGTCGCCCA CGATGGATTC ACGCTGCGCG ACCTGGTCTC CTACAACGAG AAGCACAACG AGGCCAACGG TGAGGACAAC AACGACGGGG AAAGTCACAA CCGGTCGTGG AACTGCGGTG TCGAGGGTCC CTCCGACGAC CCGGAGGTCC TCGCGCTGCG GTCCAAGCAG GAGCGCAACT TCCTGACCAC GCTGCTGTTG TCGCAGGGCG TGCCGATGAT CTGCCACGGC GACGAGTTGG GCCGCACCCA GGGTGGCAAC AACAACGGTT ACTGCCAGGA CAACGAGATC ACCTGGATCG ACTGGGCCAG TGCCGACACC GAACTGCTGG ACTTCACCCG GATGGTGTCA CGGCTGCGCG CCGAGCACCC GGTGTTCCGC AGGCGGCGCT TCTTCAGCGG CAAGCCCGTC GGCCGCCGCG GCCAGGCCGG CCTGCCGGAC ATCGCCTGGT TCACCCCCGA GGGGGCGGAG ATGACAGGCG AGGACTGGGG TTCGGGTTTC GCGAAGTCCG TCGGTGTCTA CCTGAACGGC CACGGCATCC CCGACATGGA CGCGCGCGGT CAACGCGTCA TCGACGATTC GTTTCTGCTG TTCTTCAACG CCCACCACGA ACCGATCGAG TTCACGTTGC CGCCCAAGAA GTTTGCGACG GCATGGCAGC CCGTGGTGTC CTCCGCGGCG CCGGTGGCGC CGGAACCCGG CGAGCCTCAC CAGGCCGGCG CCACGGTGTC CGTCGAGGCG AGGACCGTCC TGGTGCTGCG GGCCGAGTCG AACCCCGGCT GA
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Protein sequence | MTQIAGSSRT ALALELWPGK AYPLGATYDG SGTNFALFSE VAEKVELCLF SDDAAGGTVE TRVTLPEVDG FVWHGFIPNI EPGQRYGYRV YGPYDPAAGM RCNPNKLLLD PYSKAIDGNF DWNQSLFGYN FGDPDSRNDD DSADSMPKSV VINPFFDWGV DRPPNHEYAD TVIYEAHVKG LTQTHPDIPE QIRGTYAAVA HPAIIEHLTS LGVNAIELMP VHHFANDSTL IDKGLSNYWG YNTIGFLAPD AKYSSNPNPG GQVQEFKAMV RALHEANIEV ILDVVYNHTA EGNHLGPTLS MRGIDNAAYY RLVDDDKRYY MDYTGTGNSL NAGHPHSLQL IMDSLRYWVT EMHVDGFRFD LASTLAREFY DVDRLSTFFE LVQQDPTVSQ VKLIAEPWDV GPGGYQVGNF PPQWTEWNGK YRDTVRDFWR GEPATLDEFA YRLTGSADLY EHTARRPVAS INFVVAHDGF TLRDLVSYNE KHNEANGEDN NDGESHNRSW NCGVEGPSDD PEVLALRSKQ ERNFLTTLLL SQGVPMICHG DELGRTQGGN NNGYCQDNEI TWIDWASADT ELLDFTRMVS RLRAEHPVFR RRRFFSGKPV GRRGQAGLPD IAWFTPEGAE MTGEDWGSGF AKSVGVYLNG HGIPDMDARG QRVIDDSFLL FFNAHHEPIE FTLPPKKFAT AWQPVVSSAA PVAPEPGEPH QAGATVSVEA RTVLVLRAES NPG
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