Gene Mvan_5528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5528 
Symbol 
ID4648665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5908586 
End bp5908918 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content70% 
IMG OID639809000 
Producthypothetical protein 
Protein accessionYP_956300 
Protein GI120406471 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCG GTGGCCAGCC CGATATGTCA GCCCTCCTCG CTCAGGCCCA GCAGGTGCAG 
CAGCAGCTGA TGGAGGCCCA GGAGGCACTC GCCAACGCCG AGGTGAACGG CCAGGCCGGC
GGCGGGCTGG TACAGGTCAC CATGCGCGGC AGCGGTGAGG TGGTGGCGGT GCGGATCGAC
CCGAAGGTCG TCGACCCTTC CGATGTGGAG ACGCTGCAGG ACCTCATTGT CGGCGCGGTC
GCCGACGCCG CCAAGCAGGT CACCATCCTG GCCCACGACC GGCTCGGGCC GCTGGCCGGC
GGTATGGGTG GTCTCGGCCT GCCGGGGATG TGA
 
Protein sequence
MQPGGQPDMS ALLAQAQQVQ QQLMEAQEAL ANAEVNGQAG GGLVQVTMRG SGEVVAVRID 
PKVVDPSDVE TLQDLIVGAV ADAAKQVTIL AHDRLGPLAG GMGGLGLPGM