Gene Mvan_5365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5365 
Symbol 
ID4647081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5741251 
End bp5742198 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content71% 
IMG OID639808840 
ProductNAD-dependent glycerol-3-phosphate dehydrogenase-like protein 
Protein accessionYP_956142 
Protein GI120406313 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.937795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00190793 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGCAGC CTCCCGCGGG CGGTGATGTT CCGCACGACG GATTCCGCCC GGCCCGGCTC 
ACGATCGGTG TCATCTCCGC CGGTCGCGTC GGCACCGCCA TGGGCGTCGC ACTCGAACGC
GCCGAACACG TCGTGGTCGG CTGCAGCGCG GTGTCTGCGG CGTCCCGGGA CCGCGCTCGA
CGGTGGCTGC CCGACACCCC GATCCTGCCC GTCGACGAGG TTGCGCGGCG GGCGGAGCTG
CTGTTGCTGG CCGTACCGGA CGCGGAACTG TCCGCGCTGG TGAGCGGGCT GGCCGCCACC
GGCGCGGTGC GCCCCAACAC GATCGTGGTC CACACGTCCG GGGCCAACGG CATCGGAGTT
CTTGCGCCGC TTGCCGACCG GGGCTGCATC ACGCTGGCGA TCCATCCGGC GATGACGTTC
GTCGGCACCG ACGAGGACGT CGACCGATTG CGTGGCACCT GTTTCGGGGT GACCGCCGGT
GACGACATCG GATACGCCAT CGCGGCCTCG CTGGTGCTGG AGATCGGCGG TGAACCCTTC
CGTGTCCGCG AGGACGCAAG GACGCTGTAT CACGCGGCGC TGGCGCACTC CAGCAACCAC
GTGGTGACGG TGGTCCTCGA CGCGGTCGAC GCGCTGCGCG CGGCCCTGTG GGGGCAGGAA
CTACTGGGGC AGGAGCTGGT CGGGGACGTC CCGGGCGGTC TTCCGGAGCG GATCATCGGC
CCACTGGCGC GGGCAGCGCT GGACAACGCC CTCCGGCGCG GTCAGGCAGC CCTGACCGGT
CCGGTCGCGC GTGGCGACGC GGCCGCGGTG GCCGGCCATC TGCAGGCCCT CCGTGAGGTC
AATCCCGATC TGGCGCAGGC GTATCGGACG AATTCGTGGC GCACGGCCCA GCGTGCGCAC
GCCCCGCAGG AAGTACTCGA GGTGTTGTCG GAAGCAGGAC AATCATGA
 
Protein sequence
MVQPPAGGDV PHDGFRPARL TIGVISAGRV GTAMGVALER AEHVVVGCSA VSAASRDRAR 
RWLPDTPILP VDEVARRAEL LLLAVPDAEL SALVSGLAAT GAVRPNTIVV HTSGANGIGV
LAPLADRGCI TLAIHPAMTF VGTDEDVDRL RGTCFGVTAG DDIGYAIAAS LVLEIGGEPF
RVREDARTLY HAALAHSSNH VVTVVLDAVD ALRAALWGQE LLGQELVGDV PGGLPERIIG
PLARAALDNA LRRGQAALTG PVARGDAAAV AGHLQALREV NPDLAQAYRT NSWRTAQRAH
APQEVLEVLS EAGQS