Gene Mvan_5302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5302 
Symbol 
ID4644692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5681804 
End bp5682571 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content69% 
IMG OID639808777 
Productalpha/beta hydrolase fold 
Protein accessionYP_956079 
Protein GI120406250 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.289331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.304244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCC TCGGCCACGA GCGCGGACGC GCCTACTACC GACACTGGGC GGCGGCAGAA 
CCCGCGGCGG CCGTGGTCTT CCTGCACGGT TTCGGTGAGC ACACCGGGCT CTACCACCGG
TACGGGTTCG CGCTCAACGC GGCCGGGATC GACCTGTGGG CTGTCGACCA GTTCGGGCAC
GGGTTGAGCC CCGGCGATCG CGGCGACTTC GGCACCATCG AGGACAGCTC GGCGCTGGCC
GAACAGCTCA CCGACCTCGT CGCGCAGCAG CACCCGGGCC TGCCACTGAT CGCCCAGGGA
CATTCGTTCG GCGCGATCGT CACCCTGTTC CGGCTCCTCG ACGGTGCCGC CCGCTACCGG
GCCGCGGTCG TCTCCGGTGC CCCGCTGATC CCGATCCCGG ACCTGCTCGA CGCCGACACC
TCGTTCGACC TCGATCCGGC ATGGCTGTCC GCCGACCCGT TCTACGTGGA TTCCCTGGAG
AACGATCCGC TGGCATTCGT CGCCTCCGAC AGCACGGCGC TGACCCGGGA ACTGGACCGG
GGCTGGGACC GGTTCGGCAC CGACCTGCCG TCACTGTCGG TTCCGACGTT GGCCGTCCAC
GGCGTCAACG ACCCCATCGC GCCGATCGGA GCGGTCCGCG CCTACGCCGA GCAGATCGAG
GCATTGCAGC TGGTCGAGTT CGCAGGCGCC CGGCACGACG TCCTCAACGA GGTCCAGCAC
CGCGACGTCG CCGCCGCGAT CATCGACTTC ATCCACAGGA GTTACTAA
 
Protein sequence
MPFLGHERGR AYYRHWAAAE PAAAVVFLHG FGEHTGLYHR YGFALNAAGI DLWAVDQFGH 
GLSPGDRGDF GTIEDSSALA EQLTDLVAQQ HPGLPLIAQG HSFGAIVTLF RLLDGAARYR
AAVVSGAPLI PIPDLLDADT SFDLDPAWLS ADPFYVDSLE NDPLAFVASD STALTRELDR
GWDRFGTDLP SLSVPTLAVH GVNDPIAPIG AVRAYAEQIE ALQLVEFAGA RHDVLNEVQH
RDVAAAIIDF IHRSY