Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5298 |
Symbol | |
ID | 4644688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 5676754 |
End bp | 5678652 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639808773 |
Product | acetoacetyl-CoA synthetase |
Protein accession | YP_956075 |
Protein GI | 120406246 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.150351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGTGA CCACCATTGA GGCGCAATGG GTGCCCAGCG ACCGTGACAT CGCCGAGGCT CAGGTCACCC GGTTCGCCCG CTTCGCCGAG GAACGCACCG GAAAGACGTT CGCGGACTAC CACGCGCTGT GGCAGTGGTC GGTCGACGAC GTCGAGGCGT TCTGGGGTGC GCTGTGGGAC TACTTCGACC TCGGCGAGCG CGCCGACGTC CTCGATGGTG CGGAAATGCC TGGTGCCCGG TGGTTTCCGG GCGCCACGCT GAACTATGTC GACCAGGTCG TCCGGCAGGC GCGCACCGAC CGGCCGGCGA TCATCCACGT CAGCGAGGAC GGATCCGACC GCGAGGTGTC GTGGGCCGAA CTGCTCGGAC GGGCCGCGGC GTTCGCCGAG CGGCTGCGGG CCGCCGGGAT CGGGCCCGGC GACCGGGTGG TCGGCTATCT GCCCAACATC CCGGAGGCGG TGATCGCGTT CTTGGCGACC GCCGCCGTCG GCGCCGTCTG GAGCGCCTGC GGGCAGGACT ACTCGGCCAA GGCCGCACTC GACCGGCTCG GCCAGCTGGA GCCGAAAGCC CTGGTGGCCG CCGACGGCTA CCTGTTCGGC GGAAAGTACC GCGACAAACG CGACGACGTC CGTGCCCTGG CGGCCGGCCT GCCGACACTG CAGGCGACGT TCTCGACCGA CGACCTCGCC GAGCGCAGCG ACAATGCACT GGACCCGGTG CGGGTGCCGT TCGAGCATCC GCTGTGGATC CTGTTCTCGT CAGGCACCAC CGGCCTGCCC AAGGGCATCA TGCACGGCCA CGGCGGTGTG TTGCTCGAAC ACCTCAAGGC CGTGGCCCTG CAGTCGGACA TCGGCCGCGA CGACACGTTC TTCTGGTACA CCAGCCCCAG CTGGATGATG TGGAACTTCC AGGTCGCCGG GCTTCTGGTG GGTGCGACGA TCGTCTGTTA CGAGGGCAGC CCCAACGCGC CGCAGCCGGA CTCCTTGTGG GGCATCGCTG CGCGGATTCG TGCGACCGTG CTGGGCACCA GCCCCGGCTA TGTGCTGGGT TGCATCAAGG CCGAGGCCGA ACCCGGCCGC ACACATGATC TTTCGGCGCT GCGGACCGTC GGGATCACCG GCTCATCGCT TCCGCCGTCG TCGTCGCTGT GGCTGCGTGA CCATGTCGGT GTGCAGATCG CCTCGATCAG CGGGGGCACC GATGTGGTGT CGGCGTTCAT CGGCGGTGTG CGAACCGTCC CGGTGTGGCC CGGCGAGCTG TCGGCCCCGT ACCTCGGCGT CGCGCTCGAC GCGTGGGACG AGTCCGGCAA ACCGGTGCGC GGTGAGGTCG GCGAACTCGT GATCACCAAG CCGATGCCGT CGATGCCCGT GGGCTTCTGG AACGACCCGG ACGGAAAGCG TTACCGCTCC GCCTATTTCG AGACGTTTCC CGGTGTGTGG CGGCACGGCG ACTGGATCAC CATCACCGAC CACGGCAGCG TCATCGTGCA CGGCCGCTCC GATTCGACGT TGAACCGCCA CGGCATCCGG ATGGGCAGTG CCGACATCTA CCAGGCAGTC GAGAGCCTGC CCGAGGTCAC CGAGGCGCTG GTGATCGGCG CCGAGCAACC CGACGGCGGC TACTGGATGC CGCTGTTCGT CGTGCTCGCC GACGGCGTCG AACTCACCGA CGAGGTGAGG GAGCGCATCA ACGACATCAT TCGCAGCGAG GTGTCGCCGC GCCACGTGCC CGACGAGATC ATTCGCGCGC CGGGAGTCCC ACACACCCGC ACCGGCAAGA AGCTCGAGGT GCCGATCAAA AAGCTGTTCC AGGGCGGAGA TCCGGCGAAG GTCGTCGAGC GCAGCGCCGT CGACGACCCT GCACTGCTCG ACTGGTACGT CACGCAGCGT CGAAGTTGA
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Protein sequence | MTVTTIEAQW VPSDRDIAEA QVTRFARFAE ERTGKTFADY HALWQWSVDD VEAFWGALWD YFDLGERADV LDGAEMPGAR WFPGATLNYV DQVVRQARTD RPAIIHVSED GSDREVSWAE LLGRAAAFAE RLRAAGIGPG DRVVGYLPNI PEAVIAFLAT AAVGAVWSAC GQDYSAKAAL DRLGQLEPKA LVAADGYLFG GKYRDKRDDV RALAAGLPTL QATFSTDDLA ERSDNALDPV RVPFEHPLWI LFSSGTTGLP KGIMHGHGGV LLEHLKAVAL QSDIGRDDTF FWYTSPSWMM WNFQVAGLLV GATIVCYEGS PNAPQPDSLW GIAARIRATV LGTSPGYVLG CIKAEAEPGR THDLSALRTV GITGSSLPPS SSLWLRDHVG VQIASISGGT DVVSAFIGGV RTVPVWPGEL SAPYLGVALD AWDESGKPVR GEVGELVITK PMPSMPVGFW NDPDGKRYRS AYFETFPGVW RHGDWITITD HGSVIVHGRS DSTLNRHGIR MGSADIYQAV ESLPEVTEAL VIGAEQPDGG YWMPLFVVLA DGVELTDEVR ERINDIIRSE VSPRHVPDEI IRAPGVPHTR TGKKLEVPIK KLFQGGDPAK VVERSAVDDP ALLDWYVTQR RS
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