Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5264 |
Symbol | |
ID | 4644730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 5639493 |
End bp | 5640398 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639808739 |
Product | short chain dehydrogenase |
Protein accession | YP_956041 |
Protein GI | 120406212 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.251034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACTGC TCGACGGCCG CGTGGTCATC GTGACAGGTG CAGGTGGCGG AATCGGCAGG GCGCACGCGC TGGCGTTCGC CGCCGAGGGA GCGCGCGTGG TGGTCAACGA CATCGGCGTC GGACTGGACG GTTCCCCGGC CGGCGGAGGA AGCGCCGCCC AGGCGGTCGT CGACGAGATC GTCGGCGCCG GTGGGGAAGC GGTCACCAGC GGTGCCAACG TCGCCGACTG GGCCCAGGCC GAGGGGCTGA TCCAGACTGC CGTCGACAGT TTCGGGACTC TCGACGTCCT GGTGAACAAC GCGGGCATCG TCCGGGACCG GATGTTCGCC AACACCAGTG AGGAAGAGTT CGACGCCGTC ACCGCGGTGC ACCTGAAGGG GCACTTCGCG ACGATGAAGC ACGCCGCCGC GTACTGGCGC GCAAAGTCCA AGGCCGGCGA AAGTGTGGAC GCGCGCATCA TCAACACCAG TTCCGGTGCG GGACTGCAGG GCAGCGTCGG GCAGGCCAAC TACAGCGCCT CCAAGGCCGG CATCGCGGCA CTGACCTTGG TCGCCGCCGC CGAGATGGGC CGCTACGGCG TGAGCGTGAA CGCGATCGCC CCGTCGGCGC GGACCCGGAT GACCGAGAGC GTGTTCGCCG ACATGATGGC CACGCAGGAC AAGGACTTCG ATTCGATGGC GCCCGAGAAC ATCTCGCCGC TGGTGGTGTG GTTGGGCAGC GTCGAATCAC GTGACGTCAC GGGCAGGGTG TTCGAGGTCG AAGGCGGCAA GATTCGCGTC GCCGAGGGCT GGGCGCACGG CCCGGAAATC GACAAGGGTG CGCGCTGGGA TCCGGCCGAG CTCGGCTCCG TGGTGCCGGA TCTGCTGGCC AAGGCGCGGA CGCCGGTGCC CGTCTACGGC GCCTGA
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Protein sequence | MGLLDGRVVI VTGAGGGIGR AHALAFAAEG ARVVVNDIGV GLDGSPAGGG SAAQAVVDEI VGAGGEAVTS GANVADWAQA EGLIQTAVDS FGTLDVLVNN AGIVRDRMFA NTSEEEFDAV TAVHLKGHFA TMKHAAAYWR AKSKAGESVD ARIINTSSGA GLQGSVGQAN YSASKAGIAA LTLVAAAEMG RYGVSVNAIA PSARTRMTES VFADMMATQD KDFDSMAPEN ISPLVVWLGS VESRDVTGRV FEVEGGKIRV AEGWAHGPEI DKGARWDPAE LGSVVPDLLA KARTPVPVYG A
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