| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5249 |
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| Symbol | |
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| ID | 4645264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 5623536 |
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| End bp | 5625551 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639808724 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_956026 |
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| Protein GI | 120406197 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.566036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.80633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCT CCACCCGCGT CAGCCAGGGT GAGCTCGCGG GACTCGTTGT CGCGGTGGGC
TTCGTCAGCA TCGGGTCGCT TCTCGTTTTC GGATCGCGCA GCACGCTGCT TCTGATCGCC
GCGCCGATCG GGGCGATCGC GTTGTTTGTC GTCGCCCGAC GCCCGGTGCT GGCGCTGAGC
ATCATGGTGG TCATCGAGTT CGCCAATCTG TCCGGCCTTC TCGCGCCGAA GACCGGCCTC
CCCATCTTTC CGGCGTCGCT GTTGCTGGGG CTGATCGCCG TCGGATTCGC GCTGCGCGAT
CCACAGTGTC GGGGCCGGAT CAACGGCTGG ACAGCGGTCT GTGCGGGATT GCTCGCCGTC
TATCTGGCCA CCCAGGCGGT CGCGGGGATC GGAAGCGTCG ATACCGCAGA ATCCGTTGCG
ATCCTGCAGC GCCACGTCAT CGATTGCGTT TTCGTCATGG TGGTGCTGGT GCTGGTCCAG
GTCACGGCAC GACCCTGGAC GGTGGCCGCC GTCATCGTCG TGACGTTGGC AGCGTTGTGC
ACGCTCACCG TGATCAGCCA GGTTGTCTAC GGTGGTGCCG CGACGTTCGG CGGGTTGTCC
ACGGTGACAA CGGCATCTGG AGAGATGGTC ACCACGTTGC GCTACGGCGG TCCGCTTCCG
GACTCGAACT TCTGGGGTCG GCACCTCGTC ATGGGGTTGC CGATGGCCGC TGCGCTGATG
ACGCGCGCCC TCCGGTCCGC CCGCCGGGCG ACGGCAGCGC CCTGGGCGAT TGCACTTGCC
CTGCTGCTCT GCGGCATCTA CCTGACACAA TCTCGTGGCA CGTTCCTCGC CGCGGGTGTC
GCGATCGTGG TGTGGTTCGT GGCCGTCGAC CGCGCAGTCC GGCGGTGGGC GCTGATCCTA
ATACCGCTCG GCGTCGCCGT CTTCGCTGTC CCGGGCGTGG GCAACAGGAT GGTGGCCGCA
TTCGAGGACT TCACCCACGC ACAGGTGCAG ACCGACATCG ACCCTTCGGT CGTGCAGCGG
ATCTCTGCCC AGCAGCAGGC GTGGCTGATG TTCAACGAAC GCCCGACTTT CGGATTCGGC
CCTGCGACCT TCCCCGGCCA GGTGATCAAC TTCGCCGACC GCACCGACAT TGCTCCTCGC
GATCCGACCA ACGCGCCCCA CAATCTCTAC GCCGAACTCG CCGCGGAGTC GGGATGGGTC
GGCCTGCTCG GCTGGATGGT GGTGATCCTC GGGTTCCTGA CGATCACAGT CTTGGGCAAC
CTCGCGAATC CCTTTCGGCG CGACCGTGTC CTGGCCGCAG CGGTATGCGC GGCGATCGTC
GCGTGGTCGG TGGCCAGCAT CGGGCTGCAC ATGGCCTACT TCCGGACGTT CGGGGTGGTG
CTCGCCCTCG TCGGTGCACT TGCGCCGATG TGGCCGGTGC CGGCCGAACC CGTGCGCAGG
CTGGTCCACG GTGTGATCAC TTGGGGCACC GCGGGTCTGC TCGGGTTCGC CGCATTTTGG
ATCTTCCTGT CAGCGAACAG CTCTGCGGCC GTGACCGCCC GTCAGCCGAT GACGCTGGTC
CCCGCGGGGC CCGTCGACGG GTGGTACGCC TACGCCCTTG ACATCCGCTC CCGCGCCGAA
CTACTGCCCA CTGTCGCACG TCTGTTGGAA GACCCTCGGT CGCCGGTCGA CATCATTGCC
GACCCGGCGC GCGGCGTGCT GATATTCACG GCCACCGCGG ACAACGTCGA CCGGGCGCGC
ACCGATATCC AACGCGCAGC CGCGCATGCG GAAGCGGCCC TGCACAGCGC AATCGGCTAT
CAGCAGTACT CGCTGCAGAC TGTCGGCAGC ATGCGCGCCC AGACCACGCG GCAACCCTCA
CCAGGCACGC TGATCGTCGC CATCGGCGTG GGGGTGGGCA CCATGCTCAT CGTCCGCGCG
GTGTGGCTGC GGGCGGCAAC CCGGCGGCGC ACCGGCGCCG TTGACGATCG ACCCACGACC
CGGGAGGCGA CATCGGTACC CGCGGCAAGC CCATAG
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| Protein sequence | MTGSTRVSQG ELAGLVVAVG FVSIGSLLVF GSRSTLLLIA APIGAIALFV VARRPVLALS
IMVVIEFANL SGLLAPKTGL PIFPASLLLG LIAVGFALRD PQCRGRINGW TAVCAGLLAV
YLATQAVAGI GSVDTAESVA ILQRHVIDCV FVMVVLVLVQ VTARPWTVAA VIVVTLAALC
TLTVISQVVY GGAATFGGLS TVTTASGEMV TTLRYGGPLP DSNFWGRHLV MGLPMAAALM
TRALRSARRA TAAPWAIALA LLLCGIYLTQ SRGTFLAAGV AIVVWFVAVD RAVRRWALIL
IPLGVAVFAV PGVGNRMVAA FEDFTHAQVQ TDIDPSVVQR ISAQQQAWLM FNERPTFGFG
PATFPGQVIN FADRTDIAPR DPTNAPHNLY AELAAESGWV GLLGWMVVIL GFLTITVLGN
LANPFRRDRV LAAAVCAAIV AWSVASIGLH MAYFRTFGVV LALVGALAPM WPVPAEPVRR
LVHGVITWGT AGLLGFAAFW IFLSANSSAA VTARQPMTLV PAGPVDGWYA YALDIRSRAE
LLPTVARLLE DPRSPVDIIA DPARGVLIFT ATADNVDRAR TDIQRAAAHA EAALHSAIGY
QQYSLQTVGS MRAQTTRQPS PGTLIVAIGV GVGTMLIVRA VWLRAATRRR TGAVDDRPTT
REATSVPAAS P
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