| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5123 |
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| Symbol | |
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| ID | 4647560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 5486316 |
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| End bp | 5487113 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639808597 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_955900 |
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| Protein GI | 120406071 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.439561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.576043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACC TGTACCGGCA GCTCGCACCG GTCACCGACG CGGCATGGGC CCAGATCGAG
GAGGAGGCCA CCCGCACGTT CAAGCGCTAC ATAGCGGGTC GCCGGGTCGT CGACGTCAGC
GAGCCGGGCG GTCCTGTCAC CGCCGGGGTG AGCACCGGTC ATCTGCGCGA CGTCGCCTCC
CCCGGTGACG GTGTCGTCGC GCACCTGCGG GACGCGCAGC CGTTGGTGCG GCTGCGGGTT
CCGTTCAGCC TCAAGCGGAT CGACATCGAC GACGTCGAAC GCGGGTCGCA GGACTCCGAC
TGGGATCCGG TCAAGGAGGC CGCCAAGAAG CTGGCGTTCG CCGAGGACCG GGCGATCTTC
GAGGGCTACG AGGCCGCGCA CATCAACGGC ATCCGCAGGT CGAGTTCGTG CCCGGCCCTG
GCGCTGCCCG AGGATCCGCG CGAGATCCCC GACGTCATCA GCCAGGCGCT GTCGGAGCTG
CGGCTGGCCG GCGTCGACGG ACCGTACAGC GTGCTGTTGT CGGCCGACGT CTACACCAAG
GTGAGCGAGA CCACCGCGCA CGGCTATCCG ATCCGTGAGC ACCTCAACCG GCTCGTCGAC
GGCGACATCA TCTGGGCTCC CGCCATCGAC GGTGCGATCG TGCTGTCCAC CCGCGGCGGT
GATTTCGACC TGCAGCTGGG CACCGACGTG TGCATCGGGT ACCTGTCGCA CGACGCCGAG
ACGGTGCAGC TGTACCTGCA GGAGACGATG ACGTTCCTGT GCTACACCGC CGAGGCCTCG
GTCGCGCTCA GCGCCTGA
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| Protein sequence | MNNLYRQLAP VTDAAWAQIE EEATRTFKRY IAGRRVVDVS EPGGPVTAGV STGHLRDVAS
PGDGVVAHLR DAQPLVRLRV PFSLKRIDID DVERGSQDSD WDPVKEAAKK LAFAEDRAIF
EGYEAAHING IRRSSSCPAL ALPEDPREIP DVISQALSEL RLAGVDGPYS VLLSADVYTK
VSETTAHGYP IREHLNRLVD GDIIWAPAID GAIVLSTRGG DFDLQLGTDV CIGYLSHDAE
TVQLYLQETM TFLCYTAEAS VALSA
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