Gene Mvan_4938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4938 
Symbol 
ID4648923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5282892 
End bp5283578 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID639808409 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_955716 
Protein GI120405887 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0182005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA CGTCGAGCCA CGCGTTGGCC CAGCGGATGG CCGAGCTCGC CCGAACCGTG 
GCGTCCCCTC GCCGCGTCGA GGACGTGCTG TCCGATGTCA CCAGGGAAGT CATGGGTCTG
ATCCCCGGCG TCGACGCGGC GGGCGTGCTG TTCGTCGGTG CGCAGGGCCG TTTCGAATCG
GTGGCGGGCA CGTCGGAGCT TCCGCACCGG CTCGACGAGT TGCAGATGAA GTACCGGCAG
GGGCCGTGTC TGGAGGCCGC GCTCGACAGC CTTATCGTGC GCACCGACGA TTTCCGCACC
GAGCAGCGCT GGCCGCTGTA TTCGGCCGCG GCCGCCGAAC TGGGAGTGCT CAGCGGTCTG
TCGTTCAAGC TCTACACGAG CGCGCGGACC GCGGGCGCAC TGAACCTGTT CGCCCTGAAA
CCGAATGCGT TCGACGCCGA CGCCGAGACG ATCGGCGCCG TGTTCGCTGC GCATGCGGCC
GCCGCGATCA TGGCCAGCCG GGAGAACGAA CAGCTGCAGT CGGCACTGTC GACGCGGGAC
CGCATCGGTC AGGCCAAGGG CATCATCATG GAGCGCTACG ACGTCGACGA CGTCACGGCG
TTCGAGATGC TGCGCCGGCT GTCGCAGGAC AGCAACACCA AGCTCGTCGA GGTCGCGGCC
AAGGTCATCG AGACCAGGGG CACGTGA
 
Protein sequence
MTETSSHALA QRMAELARTV ASPRRVEDVL SDVTREVMGL IPGVDAAGVL FVGAQGRFES 
VAGTSELPHR LDELQMKYRQ GPCLEAALDS LIVRTDDFRT EQRWPLYSAA AAELGVLSGL
SFKLYTSART AGALNLFALK PNAFDADAET IGAVFAAHAA AAIMASRENE QLQSALSTRD
RIGQAKGIIM ERYDVDDVTA FEMLRRLSQD SNTKLVEVAA KVIETRGT