Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4873 |
Symbol | |
ID | 4643851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 5216962 |
End bp | 5219289 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639808344 |
Product | ATP-dependent DNA helicase PcrA |
Protein accession | YP_955652 |
Protein GI | 120405823 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.222415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCC TCTCCGTGTC TGCTGGGCCT ACCGGCACCG ATGAGCTCCT CGACGGGCTC AACCCGCAGC AGCGCCAGGC CGTGCTGCAC CAGGGCACCC CGCTGCTGAT CGTCGCGGGG GCCGGGTCGG GCAAGACGGC GGTGCTGACC CGACGCATCG CCTACCTGCT GGCCGCCCGC GACGTCGGGG TGGGCCAGGT GCTGGCCATC ACGTTCACCA ACAAGGCCGC CGCCGAGATG CGCGAACGGG TGGTGTCACT CGTGGGTCCC CGGGCCAGGA ACATGTGGGT GTCGACGTTC CATTCGACCT GTGTGCGGAT CCTGCGCAAC CAGGCCTCGC TGCTGCCCGG GCTGAACTCG AACTTCTCCA TCTACGACGC CGACGACTCC CGCCGCCTGC TGCTGATGAT CGGCAAGGAC ATGGGGCTGG ACACCAAGCG GCACTCGCCC CGGCTGCTGG CCAACGGCAT CTCCAACCTG AAGAACGAGC TGATCGGTCC CGAGCAGGCC GCCGCCGAGG CGTCCGAAGC CGAGGATGAC CTGGCCCGCA TCATCGCCAG CGTCTACGCC GAGTACCAGC GCAGGCTGCG CGCGGCCAAC GCGCTGGACT TCGACGACCT GATCGGCGAG ACCGTGGCCG TGTTGCAGGC GTTTCCGCAG ATCGCCCAGT ACTACCGGCG CCGCTTCCGG CACATCCTGG TCGACGAGTA TCAGGACACC AACCATGCGC AGTACGTGCT GGTGCGTGAG TTGGTCGGAA CCGAAACCGT CGACGGGGTC CCGCCGGCCG AGCTGTGCGT CGTCGGTGAC GCGGACCAGT CGATCTATGC GTTCCGCGGC GCCACGATCC GCAACATCGA GGATTTCGAG CGCGACTTCC CCAACGCCAC AACGATTCTG CTGGAACAGA ACTACCGCTC CACCCAGACC ATCCTCAACG CCGCGAACTC GGTGATCGCC CGCAACGTCG GCAGGCGCGA CAAGCGGCTG TGGACCGACG CCGGCGAGGG TGAGCTGATC GTCGGCTACG TCGCCGACAA CGAGCACGAC GAGGCCCGCT TCGTCGCGCA GGAGATCGAC GCGCTGTCCG ACGCCGTCGC CGATTTCTCC TACAACGACG TCGCGGTGTT CTACCGCACG AACAACTCCT CGCGCGCCAT CGAGGAGGTG TTCATCCGGG CCGGTATCCC GTACAAGGTG GTCGGGGGAG TGCGCTTCTA CGAGCGCAGG GAGATCCGCG ACATCGTGGC CTACCTGCGG GTGCTCGACA ACCCGGGCGA CTCGGTGAGC ATGCGGCGCA TCCTCAACAC CCCGCGCCGC GGGATCGGCG ACCGCGCCGA GGCCTGTGTG GCGGTGTACG CCGAGACCAC CGGGGCCAAC TTCAACGACG CGCTCGCGGC CGCCGCCGAG GGCAAGGTGC CGATGCTCAA CACCCGGTCG GAGAAGGCCA TCAAGGGTTT CGTCGAGCTG CTCGACGAAC TGCGCGGTGG GCTCGACGGT GAACTCGGCG ACCTCGTCGA AACCGTGCTG GACCGCACCG GCTACCGCGC CGAGCTGGAA GCCTCAAGCG ATCCGCAGGA TCTGGCCAGG CTCGACAACC TGAACGAATT GGTCAGCGTC GCACACGAAT TCAGCATCGA CCTGGCCAAC GCCAAGGCAC TGGCCAGTGA AGAGGGAGCC GAGCCGCAGG ACGAGGACGT GCCCGACACC GGAGTCCTTG CCGCTTTCCT GGAGCGGGTG TCCCTGGTCG CCGACGCCGA CGACATTCCC GAACACGGGG CGGGCGTCGT CACCATGATG ACGCTGCACA CCGCCAAGGG GCTGGAGTTC CCGGTCGTCT TCGTCACCGG CTGGGAGGAC GGCATGTTCC CGCACATGCG CGCGCTCGGT GATCCCGGCG AGCTGTCCGA GGAACGCCGA CTGGCCTACG TCGGCATCAC CCGCGCCCGT CAGCGCCTCT ATCTCAGCCG CGCCAAGGTG CGGTCGTCGT GGGGGCAGCC CATGCTGAAC CCGGAATCGC GGTTCCTGCG CGAGATCCCT CAGGAGCTCA TCGACTGGCG TCGCACCGAG CAGCCGTCGT CGTTCTCGGC GCCGGTCGGC AACGCCGGTC GGTACGGCGC CCCGCGTCCG TCACCGACGC GTCCGGCGGC CGGGAAGCGG CCGCTGATCG TGCTCGAACC CGGGGACCGC GTCACCCACG ACAAGTACGG CCTGGGCCGG GTCGAGGAAG TGTCCGGGGC CGGCGAATCG GCGATGTCGC TGATCGACTT CGGCAGCGCG GGGCGCGTCA AGCTGATGCA CAACCACGCG CCCGTCAGCA AGCTCTAA
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Protein sequence | MTSLSVSAGP TGTDELLDGL NPQQRQAVLH QGTPLLIVAG AGSGKTAVLT RRIAYLLAAR DVGVGQVLAI TFTNKAAAEM RERVVSLVGP RARNMWVSTF HSTCVRILRN QASLLPGLNS NFSIYDADDS RRLLLMIGKD MGLDTKRHSP RLLANGISNL KNELIGPEQA AAEASEAEDD LARIIASVYA EYQRRLRAAN ALDFDDLIGE TVAVLQAFPQ IAQYYRRRFR HILVDEYQDT NHAQYVLVRE LVGTETVDGV PPAELCVVGD ADQSIYAFRG ATIRNIEDFE RDFPNATTIL LEQNYRSTQT ILNAANSVIA RNVGRRDKRL WTDAGEGELI VGYVADNEHD EARFVAQEID ALSDAVADFS YNDVAVFYRT NNSSRAIEEV FIRAGIPYKV VGGVRFYERR EIRDIVAYLR VLDNPGDSVS MRRILNTPRR GIGDRAEACV AVYAETTGAN FNDALAAAAE GKVPMLNTRS EKAIKGFVEL LDELRGGLDG ELGDLVETVL DRTGYRAELE ASSDPQDLAR LDNLNELVSV AHEFSIDLAN AKALASEEGA EPQDEDVPDT GVLAAFLERV SLVADADDIP EHGAGVVTMM TLHTAKGLEF PVVFVTGWED GMFPHMRALG DPGELSEERR LAYVGITRAR QRLYLSRAKV RSSWGQPMLN PESRFLREIP QELIDWRRTE QPSSFSAPVG NAGRYGAPRP SPTRPAAGKR PLIVLEPGDR VTHDKYGLGR VEEVSGAGES AMSLIDFGSA GRVKLMHNHA PVSKL
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