Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4601 |
Symbol | |
ID | 4646942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4941173 |
End bp | 4942537 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639808071 |
Product | virulence factor Mce family protein |
Protein accession | YP_955382 |
Protein GI | 120405553 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0155003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCGCA CCCTCCGGAT CCTGCTGATC GCCTCACTCT CCGTGATCCT CGTGGGCGGC GTGGTTGTGC TGTTGCGCAC CACCGAAGCG ATCAACCGCA CACATGCCGT CGCGTACTTC GAGAACAGCA ACGGCATCTA TGCAGGCGAC GCTGTCAGCA TCGTCGGTGT GCCCGTCGGC AAGATCGAGT CCATCGAGCC GCAGCCCGAG TCGGTCAAGG TCTCCTTCTG GTACGACAGC AAGTACAAGG TCCCGGCCGA CGCGAAGGCG GTGATCTTGT CGCCCACGCT GGTGACGGCC CGGACCATTC AGCTCACTCC CGCCTATACG GGTGGGCCGG TGATGGAGAA CGACGCGGTC ATCCCACGGG AACGCACCGC GGTCCCGGTG GAGTGGGACG AGGTTCGCCA GCAACTGGCG AAGCTGGCCG ACACCTTGCA GCCGACCGAG CCCGGCGGCG TGAGCCCGCT CGGCTCCGTC ATCAACACCA CCGCCGACAA TCTGCGTGGC GAGGGTGCCA ACATCCGGGA CACCGTCATC AAGCTGTCGC AGGCCATTTC GGCCCTCGGT GACAACAGCA CCAACATCTT CTCCACGGTC AAGAACCTGG CCACCCTGGT GTCGGCGCTG CAGGACAGCA CCAACCTGAT GCGGCAGCTC AACCAGAACC TCGCGAGCGT GACCGGCCTA CTCGCCAACG ATCCCGACGA GGTGGCCAAC GCGGTCCGCG ACCTCGACAA GGCCGTCGGC GAGGTCCAGA CGTTCGTGGC CGACAATCGC GAATCGCTGG GCACCACCTC GGACAAGCTG GCGGGGGTGA CCCAGGCGTT GACGGACAGT CTCGCCGATG TGAAGCAGTT CCTGCACGTG GCTCCCAACA CCTTGCAGAA CTACGTCAAC ATCTGGCAAC CCGCCCAGGG TGCGGTCAGC AGCGTGCCGA TGATCAACAA CTTCGCCGAT CCGGTCTCCT TCCTGTGCGG CGCGGTTCAG GCGGCGTCAC GCCTGGGCGC CGAGGAGTCG GCGAAGTTGT GCGTGCAATA CATGGCCCCG ATCATCAAGA ACCGGCAGTA CAACTTCCTG CCGCTCGCGC AGAACGTCTT CGTCGGTGCC ACCACCCGGC CGAATGAGCT CACCTACAGC GAGGACTGGC TGCGGCCCGA TTACATTCCG CCGCAACCAG GTTCGGCGGC GCCGCCGCCA CCCGCAGGTG CGCCGCAGCC CGCGGCAGGT GCGCCACAGC CACCGGCAGG TGCGCCGCTG CCCCCGGCGC TGGGTCCGCT CTTGCCCGCG GAGGCGGTGC CCACCGCGCC CAACCCGGCT GACGGCCTTC AGGGCCTGAT GGTGCCGGCT GGAGCGGGAT CATGA
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Protein sequence | MTRTLRILLI ASLSVILVGG VVVLLRTTEA INRTHAVAYF ENSNGIYAGD AVSIVGVPVG KIESIEPQPE SVKVSFWYDS KYKVPADAKA VILSPTLVTA RTIQLTPAYT GGPVMENDAV IPRERTAVPV EWDEVRQQLA KLADTLQPTE PGGVSPLGSV INTTADNLRG EGANIRDTVI KLSQAISALG DNSTNIFSTV KNLATLVSAL QDSTNLMRQL NQNLASVTGL LANDPDEVAN AVRDLDKAVG EVQTFVADNR ESLGTTSDKL AGVTQALTDS LADVKQFLHV APNTLQNYVN IWQPAQGAVS SVPMINNFAD PVSFLCGAVQ AASRLGAEES AKLCVQYMAP IIKNRQYNFL PLAQNVFVGA TTRPNELTYS EDWLRPDYIP PQPGSAAPPP PAGAPQPAAG APQPPAGAPL PPALGPLLPA EAVPTAPNPA DGLQGLMVPA GAGS
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