Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4599 |
Symbol | |
ID | 4646940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4938521 |
End bp | 4940020 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639808069 |
Product | virulence factor Mce family protein |
Protein accession | YP_955380 |
Protein GI | 120405551 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.376755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTGA CTCGTCAAAT CCTCATCCAG ATGGCGATCT TCGCCGTCAT AGCGACGACT GCCCTGGTGA TCATGGTCTT CGCCTACATG CGGTTGCCCG CGTTCCTGGG CATCGGGCAG TACCGGGTGA CCCTGGAGTT GCCCGAGACG GGCGGCCTGT ATCCGAGGGG CAACGTCACC TACCGCGGCG TCGAGGTGGG GGAGGTCAAG AGCGTCCAGC TGACCGACAC CGGCGTCGAG GCGGTGCTGT CGCTGAACGA CAACGTCGAG ATCCCCGCCA ACCTCGAAGC CGAGGTGCAC AGCGTGTCCT CCGTCGGTGA GCAGTTCGTC CAGTTGCTGC CGCGCAGCGC CGACGGGCCG GTGCTGAAGG ACGGCGACGT CATCCCGATA AACCGCACGA CGGTTCCGAC GGACATCAAC GGGGTCCTGG ACGCCACGAA CGCCGGCCTT GAGGCTATCC CGCAGGAGAA CCTGCAGACG GTTATCGACG AGGCCTACAC CGCCGTCGGC GGGCTGGGGC CTGAACTGCG CCGCCTGGTC ACCGGGAGCA CAGCGCTGGC GATCGACGCC CGCAAGAACC TCGAGTCGCT GACGACGCTG ATCGACCAGT CCAAACCGGT GTTGGATTCG CAGACCGAGA CCGGGGACTC GATCCAGGCG TGGGCGGCGA ATCTGGCCAG TATCTCCGGT CAGCTGCAGA GCCAGGACCC CGCCGTGGCG GGGATTCTGG ACAAGGGACC GGGCGGCGCC GAGGAGGTGC GGGCGCTGTT CGACCGCCTG CAACCGACAC TGCCGATCGT GCTGGCCAAC CTGGTGAGCA TCGGCGAGGT GGCGGTCACC TATCAGCCCA GCCTCGAGCA GTTGCTGGTG CTGCTGCCGC AGGGCACCGC GGTCACGCAG GCCGTCGGCG TGCACAAGCG CAACACCAAG CAGGACTACA TGGGTGATGC CCTGGTCTTC AACCTGAACC TGGCGATCCC GCTGCTGCCT GCGCCGATCC CGTTGCCGCC GCAGCAGTTG CCGCCCCCGT GCACCACCGG CTTCCTGCCG GCGCAGCAGC GTCGGGTGCC GACCTTCGAG GACTACCCCG ACAGGCCGGT GGGCAACCTG TACTGCCGCG TCCCGCAGGA TGCGCCGTTC AACGTCCGCG GCGCCCGCAA CCTGCCGTGC ATCTCCGTAC CGGGCAAACG CGCCCCGACA TGGCAGGACT GCGAAAGCAA CGAGGTCTAC GTGCCGCTCA ACGACGGCTA CAACTGGAAG GGCGATCCGA ACGCCACCCT GTCCGGGGAG CCGATTCCAG ACGTGCCGCC GGATGTTCCG GTCGCGGTGA CGCCTCCTCC ACCGGGGACG CCGCCGCTGC CCGTCGCGGC CGCCGAATAC GACCCCGCGT CTGGCGAATA CGTCGGACCG GACGGGAAGG TGTACACCCA GTCCAACCTT GCCGATGGTG CGTCCGGGGA GCGGCCGTGG CAGTCGATGC TCGTCCCGCC CGGCGGCTGA
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Protein sequence | MRLTRQILIQ MAIFAVIATT ALVIMVFAYM RLPAFLGIGQ YRVTLELPET GGLYPRGNVT YRGVEVGEVK SVQLTDTGVE AVLSLNDNVE IPANLEAEVH SVSSVGEQFV QLLPRSADGP VLKDGDVIPI NRTTVPTDIN GVLDATNAGL EAIPQENLQT VIDEAYTAVG GLGPELRRLV TGSTALAIDA RKNLESLTTL IDQSKPVLDS QTETGDSIQA WAANLASISG QLQSQDPAVA GILDKGPGGA EEVRALFDRL QPTLPIVLAN LVSIGEVAVT YQPSLEQLLV LLPQGTAVTQ AVGVHKRNTK QDYMGDALVF NLNLAIPLLP APIPLPPQQL PPPCTTGFLP AQQRRVPTFE DYPDRPVGNL YCRVPQDAPF NVRGARNLPC ISVPGKRAPT WQDCESNEVY VPLNDGYNWK GDPNATLSGE PIPDVPPDVP VAVTPPPPGT PPLPVAAAEY DPASGEYVGP DGKVYTQSNL ADGASGERPW QSMLVPPGG
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