Gene Mvan_4586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4586 
Symbol 
ID4646927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4925242 
End bp4926063 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID639808056 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_955367 
Protein GI120405538 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.142813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTTC TCGACTTGGC CGTGACCAAT TCGTGCACTT ACCATGCCAG GCGACTTGAC 
AAGCGTAAGG AGCACACCGT GAAGACCCGC ACCAGCAAGG CCATCGGCGT CGCTGTCAGT
GCCGCCGCGA TCGCCCTGTC GGTTCCACTG GCCATCAACG CTCACGCCGA GCCGTCCACC
CCGGTGGCCG AGATCCCGGA TCCGCAGGGA CCCGACTGCG GCGCGTTCAA GGAGGCGCTG
CCGAACTGGA AGGGGCTGGC GAACCTGCCC GTCAGCACCG CACTGTCCTC GATCCCCGAC
ATCTCGTCGT TCAACTCCGC GATCTCCGGG CAGCTGAACC CGGCCGTCAA CATCACCGGG
GTGCTCGACA ACGGGCCGTA TGTCGTGTTC GCGCCCACCA ACGAGGCGTT CGCGGCGCTG
CCGCCCGAGC AGCTGGAGGT GCTGCGCACC GATCCGGCCG CGCTGACCAG CCTGGTGTAC
TACCACGTGT TCCTCGGCCT GCTCGGCCCT GACGACGTCA AGGGGCAGCG TCCCACCCAG
CAGGGCACCG AGATCGAGGT GACGGGCTCC GGCGGCGACA TCGCGGTCAA CGAGACCACC
AAGGTCGTCT GCGGTGGCAT CCAGGCGCAG AACGCGCGGA TCTACATCGT CGATCAGGTT
CTCAACCCGG CCGAGGCGCC GGCCCCGATC ACGCCCACCA GCACGTCTGA GACGAGCTCG
ACCGAGACGA CGACCCCCAC CACCCCGACG TCGACGGAGA CGCCGCCGCC GGCTCCGGCC
GAGGCGCCCA CCGTGCCCGC GGCCGAAGCA CCCATCGGCT AG
 
Protein sequence
MRVLDLAVTN SCTYHARRLD KRKEHTVKTR TSKAIGVAVS AAAIALSVPL AINAHAEPST 
PVAEIPDPQG PDCGAFKEAL PNWKGLANLP VSTALSSIPD ISSFNSAISG QLNPAVNITG
VLDNGPYVVF APTNEAFAAL PPEQLEVLRT DPAALTSLVY YHVFLGLLGP DDVKGQRPTQ
QGTEIEVTGS GGDIAVNETT KVVCGGIQAQ NARIYIVDQV LNPAEAPAPI TPTSTSETSS
TETTTPTTPT STETPPPAPA EAPTVPAAEA PIG