Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4586 |
Symbol | |
ID | 4646927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 4925242 |
End bp | 4926063 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639808056 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_955367 |
Protein GI | 120405538 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.142813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGTTC TCGACTTGGC CGTGACCAAT TCGTGCACTT ACCATGCCAG GCGACTTGAC AAGCGTAAGG AGCACACCGT GAAGACCCGC ACCAGCAAGG CCATCGGCGT CGCTGTCAGT GCCGCCGCGA TCGCCCTGTC GGTTCCACTG GCCATCAACG CTCACGCCGA GCCGTCCACC CCGGTGGCCG AGATCCCGGA TCCGCAGGGA CCCGACTGCG GCGCGTTCAA GGAGGCGCTG CCGAACTGGA AGGGGCTGGC GAACCTGCCC GTCAGCACCG CACTGTCCTC GATCCCCGAC ATCTCGTCGT TCAACTCCGC GATCTCCGGG CAGCTGAACC CGGCCGTCAA CATCACCGGG GTGCTCGACA ACGGGCCGTA TGTCGTGTTC GCGCCCACCA ACGAGGCGTT CGCGGCGCTG CCGCCCGAGC AGCTGGAGGT GCTGCGCACC GATCCGGCCG CGCTGACCAG CCTGGTGTAC TACCACGTGT TCCTCGGCCT GCTCGGCCCT GACGACGTCA AGGGGCAGCG TCCCACCCAG CAGGGCACCG AGATCGAGGT GACGGGCTCC GGCGGCGACA TCGCGGTCAA CGAGACCACC AAGGTCGTCT GCGGTGGCAT CCAGGCGCAG AACGCGCGGA TCTACATCGT CGATCAGGTT CTCAACCCGG CCGAGGCGCC GGCCCCGATC ACGCCCACCA GCACGTCTGA GACGAGCTCG ACCGAGACGA CGACCCCCAC CACCCCGACG TCGACGGAGA CGCCGCCGCC GGCTCCGGCC GAGGCGCCCA CCGTGCCCGC GGCCGAAGCA CCCATCGGCT AG
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Protein sequence | MRVLDLAVTN SCTYHARRLD KRKEHTVKTR TSKAIGVAVS AAAIALSVPL AINAHAEPST PVAEIPDPQG PDCGAFKEAL PNWKGLANLP VSTALSSIPD ISSFNSAISG QLNPAVNITG VLDNGPYVVF APTNEAFAAL PPEQLEVLRT DPAALTSLVY YHVFLGLLGP DDVKGQRPTQ QGTEIEVTGS GGDIAVNETT KVVCGGIQAQ NARIYIVDQV LNPAEAPAPI TPTSTSETSS TETTTPTTPT STETPPPAPA EAPTVPAAEA PIG
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