Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4564 |
Symbol | |
ID | 4649028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 4903575 |
End bp | 4905206 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639808034 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_955345 |
Protein GI | 120405516 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.252386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.41587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC TGCTGGCCCA GACCGAGACC ATCGGCAACC CGGTCGCCAA CATCGGCATC TTCAGCCTGT TCGTCGTCGT CACGATGATC GTGGTGATCC GGGCGAGCAA GCGCAACGCC ACCGCCGACG AGTTCTTCAC CGGCGGGCGC GGCTTCTCCG GCCCGCAGAA CGGCATCGCC ATCGCCGGTG ACTATCTGTC GGCCGCCAGC TTCCTCGGCA TCGCCGGCGC CATCGCGGTC TACGGCTACG ACGGCTTCCT GTACTCGATC GGCTTCCTGG TGGCGTGGCT GGTGGCTCTG CTCCTGGTGG CCGAATTGCT ACGTAACACA GGCAGATTCA CGATGGCCGA CGTGCTGAGC TTCCGCCTCA AGCAGCGGCC GGTGCGGTTG GCCGCGGCCA CCAACACGTT GACGGTGTCG CTGTTCTACC TGCTGGCCCA GATGGCCGGC GCCGGTGGCC TGGTGGCGCT GCTTCTGGAC ATCAACAGCC GCACCGGACA GTCCGTCGTG ATCGCCGTGG TCGGCGTGCT GATGATCGTC TACGTCCTGG TCGGCGGCAT GAAGGGCACC ACCTGGGTGC AGATCATCAA GGCCGTCCTG CTGATCGCCG GCGCGGGCTT CATGACGGTC ATGGTGCTCG CGAAGTTCGG GATGAACTTC TCCGAGATCC TCGGCTCGGC GCAATCCGCC ATCAGCGGTT CGACCACCAC CGGCGTCGCC GGCCGCGACG TGCTGGCCCC CGGTGCGCAG TACGGCGGGT CGCTGACCTC GCAGATCAAC TTCATCTCGC TGGCGATCGC GCTGGTGCTC GGCACCGCGG GCCTGCCGCA CGTGCTGATG CGCTTCTATA CGGTGCCGAC CGCCAAGGAG GCACGACGAA GCGTCGTCTG GGCGATCGCG CTGATCGGCG CGTTCTACCT GTTCACCCTG GTGCTGGGCT ACGGCGCGGC AGCTCTGGTG GGTCCCGACC GCATCCTGGG CGCGGCGGGC GGGGTGAACT CGGCGGCTCC GCTGCTGGCG TTCGAGCTCG GTGGGGTGGT GCTGCTTGGG GTCATCTCCG CGGTGGCGTT CGCGACGATC CTGGCTGTCG TGGCGGGGCT GACGATCACC GCCTCGGCGT CGTTCGCCCA CGACATCTAC GCCAGCGTGA TGAAGTCGCA CAAGGTGACC GAGGCCGAAC AGGTCCGGGT CTCCCGGATC ACCGCGGTCG TGCTCGGTGT GCTCGCCATC GGCCTCGGCA TCCTGGCCAA CGGGCAGAAC ATCGCGTTCC TGGTGGCGCT GGCGTTCGCG GTCGCCGCGG CGGCCAACCT TCCGACGATC ATCTACTCGC TGTACTGGAG GCGTTTCAAC ACCCGCGGCG CGCTGTGGAG CATGTACGGC GGGCTGATCT CGACCATCGT GCTGATCGTC TTCTCCCCCG CGGTGTCGGG ATCGAAGACC GCGATGATCC CGGGTGCGGA CTTCGCCTGG TTCCCGCTGG CCAACCCGGG CATCGTGTCG ATCCCGCTGG CGTTCATCCT CGGCATCGTC GGCACCCTGA CCTCACCGGA CGACGAGGAT CCGAAGGTCG CCGCCGAGAT GGAGGTCCGC TCGCTGACCG GCATCGGCGC CGAGAAGGCG GTCGCCCACT AG
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Protein sequence | MTTLLAQTET IGNPVANIGI FSLFVVVTMI VVIRASKRNA TADEFFTGGR GFSGPQNGIA IAGDYLSAAS FLGIAGAIAV YGYDGFLYSI GFLVAWLVAL LLVAELLRNT GRFTMADVLS FRLKQRPVRL AAATNTLTVS LFYLLAQMAG AGGLVALLLD INSRTGQSVV IAVVGVLMIV YVLVGGMKGT TWVQIIKAVL LIAGAGFMTV MVLAKFGMNF SEILGSAQSA ISGSTTTGVA GRDVLAPGAQ YGGSLTSQIN FISLAIALVL GTAGLPHVLM RFYTVPTAKE ARRSVVWAIA LIGAFYLFTL VLGYGAAALV GPDRILGAAG GVNSAAPLLA FELGGVVLLG VISAVAFATI LAVVAGLTIT ASASFAHDIY ASVMKSHKVT EAEQVRVSRI TAVVLGVLAI GLGILANGQN IAFLVALAFA VAAAANLPTI IYSLYWRRFN TRGALWSMYG GLISTIVLIV FSPAVSGSKT AMIPGADFAW FPLANPGIVS IPLAFILGIV GTLTSPDDED PKVAAEMEVR SLTGIGAEKA VAH
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