Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4402 |
Symbol | |
ID | 4648741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4724007 |
End bp | 4724690 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639807873 |
Product | 3-oxoacid CoA-transferase, B subunit |
Protein accession | YP_955184 |
Protein GI | 120405355 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.377192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCCG CGCACGAGGT GGTGCAGCGC ACGGACCGCC CGCCCCTGTC AATGGACGAA TTGGCGATCC TGATCGCTAA GGACATTGCC CCGGGTTCAT ATGTCAACTT GGGAATCGGC CACCCCACGA AGATCGCCGA GCACCTTCCC GCGGATTCAG GGGTGGTGTT GCACACGGAG AACGGCATGT TGGGCATGGG GCCGGCAGCG ATCGGAGTGG CCGTCGACCC CGACCTGACC AACGCTGGGA AGGAGCCGGT CACCGAACTC CCCGGGGCAG CTTACTTCCA CCATGCGGAC TCCTTCGCGA TGATGCGCGG TGGACACCTC GACGTGTGCG TGCTCGGTGC CTACCAGGTC TCCGAGTCCG GTGATCTCGC CAACTGGCAC ACCGGAAAAC CGGACGCGAT CCCTGCGGTG GGCGGGGCGA TGGACCTGGC GATCGGCGCG AAGAGCGTCT TCGTGATGAT GTCGCTGTTC ACCAAGGCTG GTGTCCCAAA AGTGGTACCG GCATGCAGCT ATCCGCTCAC CGGTGTGGCC TGCGTCAGCC GGATCTACAC CGATCACGCG GTACTCGATG TCCACCCGAG CGGAATACAG GTCAGGCGAA CATTCGGTAT TTCGCTGGCG GAGTTGAAGA ACCGGCTCGG TGATTGCCGA ATCCATGCAT GGACCGGACC CTGA
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Protein sequence | MTAAHEVVQR TDRPPLSMDE LAILIAKDIA PGSYVNLGIG HPTKIAEHLP ADSGVVLHTE NGMLGMGPAA IGVAVDPDLT NAGKEPVTEL PGAAYFHHAD SFAMMRGGHL DVCVLGAYQV SESGDLANWH TGKPDAIPAV GGAMDLAIGA KSVFVMMSLF TKAGVPKVVP ACSYPLTGVA CVSRIYTDHA VLDVHPSGIQ VRRTFGISLA ELKNRLGDCR IHAWTGP
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