Gene Mvan_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4289 
Symbol 
ID4648391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4596084 
End bp4596929 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content70% 
IMG OID639807757 
Productglutamate racemase 
Protein accessionYP_955072 
Protein GI120405243 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.244249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC CGACCGAGCC CACCGGGATG CCCATCGGGA TCTTCGATTC CGGGGTGGGC 
GGGCTGACGG TGGCGCGCGC GGTGATCGAC CAACTGCCCG ACGAAGACAT CATCTACATC
GGTGACACCG GCAACGGGCC GTACGGGCCG CTGACCATCC CCGAGATCCG CGCGCACGCG
CTGGCGATCG GCGACGACCT CGCCGGGCGG GGCATCAAGG CGCTGGTGAT CGCGTGCAAC
TCCGCGTCCT CGGCCTGCCT GCGCGATGCC CGGGAGCGCT ACGCGCCGAT CCCGGTGGTC
GAGGTGATCC TGCCCGCGGT ACGCCGCGCG GTGGCCACCA CCCGCAACGG CCGCATCGGC
GTCATCGGCA CCGCGGCGAC GATCGCGTCG GGCGCCTACC AGGACACGTT CGCCGCTGCG
CGCGACATCG AGGTGTTCGG CGTGGCCTGC CCGCGCTTCG TCGACTTCGT CGAGCGCGGC
GTGACCAGCG GCCGCCAGGT GCTCGGTCTG GCCGAGGGAT ATCTGGAGCC GCTGCAGCGG
GCCGAGGTCG ACACGCTGGT GCTGGGTTGC ACGCACTACC CGATGCTCTC GGGCCTGATC
CAGTTGGTCA TGGGCGACCA CGTGACACTG GTGTCGAGCG CGGAGGAGAC GGCCAAGGAT
CTGCTCCGGG TGCTCACCAA ACGGGAGTTG CTGAAACCAC ACCCCGGCGA CCCTGCTGTG
CGGGCGCACA GGCAATTCGA GGCGACCGGG GATCCCGAGG CGTTCACCGC GCTCGCGGCT
CGTTTCCTCG GTCCCACTCT GGACGGTGTC CGGCCTGTTC AGCGTCACGT CGGCACGCGA
ACATGA
 
Protein sequence
MSGPTEPTGM PIGIFDSGVG GLTVARAVID QLPDEDIIYI GDTGNGPYGP LTIPEIRAHA 
LAIGDDLAGR GIKALVIACN SASSACLRDA RERYAPIPVV EVILPAVRRA VATTRNGRIG
VIGTAATIAS GAYQDTFAAA RDIEVFGVAC PRFVDFVERG VTSGRQVLGL AEGYLEPLQR
AEVDTLVLGC THYPMLSGLI QLVMGDHVTL VSSAEETAKD LLRVLTKREL LKPHPGDPAV
RAHRQFEATG DPEAFTALAA RFLGPTLDGV RPVQRHVGTR T