Gene Mvan_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4220 
Symbol 
ID4645905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4526558 
End bp4527277 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content65% 
IMG OID639807687 
ProductTetR family transcriptional regulator 
Protein accessionYP_955003 
Protein GI120405174 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGC GTTCTCCGGT ACAGTCAGTT CGTGTTCTCC CCAATCGGCC TGCATCCGAG 
CCTCCGGTGA CCAGTCCCAG CGAAGAGCCC GCATGGAAGC AGCGCGCGGT TGAACGCTCC
ATCAAGACGG CCAAACTGCG CGCCGCTCAG CGCGTGCAGC GATTCCTCGA CGCCGCACAG
GCCATCATCA TCGAGAAGGG CAGCACGGAC TTCACCGTCC AAGAGGTCGT CGACCGCTCC
CGCCAGTCGC TGCGTAGCTT CTACCTGCAG TTCGACGGTA AGCACGAACT TCTCCTGGCC
CTGTTCGAGG ATGCCCTCAG CCGCTCGGCC GACCAAATTC GCGCCGCCAC CGGCGGGCAC
GAAGAACCGA TAGAACGCCT GAAGGTGGCC ATCCAGCTGC TCTTCGAATC CTCCCGACCG
GACCCTGCCG CCAAGCGGCC GCTGTTCACC GACTTCGCGC CGCGGTTGCT GGTGTCGCAC
CCTTCCGAGG TCAAGGTGGC CCATGCGCCG CTGTTGGCGT TGCTCACCGA GCTGATGGAA
GAGGCCAGCG CGGCCGGCCA ACTCCGGGAC GGCATCAACC CGAAGCGGAT GGCCGCGATG
ACCATGCAGA CCGTCATGTT CGTGGCCCAG TCCAGCGGAG ACGTCGACGA GAACGCCGCC
AATCCCATCA CCGCCGACGA GGTCTGGGAC TTCTGCGCCC ACGGCTTCGC CGCCGTCTGA
 
Protein sequence
MARRSPVQSV RVLPNRPASE PPVTSPSEEP AWKQRAVERS IKTAKLRAAQ RVQRFLDAAQ 
AIIIEKGSTD FTVQEVVDRS RQSLRSFYLQ FDGKHELLLA LFEDALSRSA DQIRAATGGH
EEPIERLKVA IQLLFESSRP DPAAKRPLFT DFAPRLLVSH PSEVKVAHAP LLALLTELME
EASAAGQLRD GINPKRMAAM TMQTVMFVAQ SSGDVDENAA NPITADEVWD FCAHGFAAV