Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4220 |
Symbol | |
ID | 4645905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 4526558 |
End bp | 4527277 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639807687 |
Product | TetR family transcriptional regulator |
Protein accession | YP_955003 |
Protein GI | 120405174 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAGGC GTTCTCCGGT ACAGTCAGTT CGTGTTCTCC CCAATCGGCC TGCATCCGAG CCTCCGGTGA CCAGTCCCAG CGAAGAGCCC GCATGGAAGC AGCGCGCGGT TGAACGCTCC ATCAAGACGG CCAAACTGCG CGCCGCTCAG CGCGTGCAGC GATTCCTCGA CGCCGCACAG GCCATCATCA TCGAGAAGGG CAGCACGGAC TTCACCGTCC AAGAGGTCGT CGACCGCTCC CGCCAGTCGC TGCGTAGCTT CTACCTGCAG TTCGACGGTA AGCACGAACT TCTCCTGGCC CTGTTCGAGG ATGCCCTCAG CCGCTCGGCC GACCAAATTC GCGCCGCCAC CGGCGGGCAC GAAGAACCGA TAGAACGCCT GAAGGTGGCC ATCCAGCTGC TCTTCGAATC CTCCCGACCG GACCCTGCCG CCAAGCGGCC GCTGTTCACC GACTTCGCGC CGCGGTTGCT GGTGTCGCAC CCTTCCGAGG TCAAGGTGGC CCATGCGCCG CTGTTGGCGT TGCTCACCGA GCTGATGGAA GAGGCCAGCG CGGCCGGCCA ACTCCGGGAC GGCATCAACC CGAAGCGGAT GGCCGCGATG ACCATGCAGA CCGTCATGTT CGTGGCCCAG TCCAGCGGAG ACGTCGACGA GAACGCCGCC AATCCCATCA CCGCCGACGA GGTCTGGGAC TTCTGCGCCC ACGGCTTCGC CGCCGTCTGA
|
Protein sequence | MARRSPVQSV RVLPNRPASE PPVTSPSEEP AWKQRAVERS IKTAKLRAAQ RVQRFLDAAQ AIIIEKGSTD FTVQEVVDRS RQSLRSFYLQ FDGKHELLLA LFEDALSRSA DQIRAATGGH EEPIERLKVA IQLLFESSRP DPAAKRPLFT DFAPRLLVSH PSEVKVAHAP LLALLTELME EASAAGQLRD GINPKRMAAM TMQTVMFVAQ SSGDVDENAA NPITADEVWD FCAHGFAAV
|
| |