Gene Mvan_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4088 
Symbol 
ID4648696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4380192 
End bp4380686 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID639807553 
Productdehydratase 
Protein accessionYP_954871 
Protein GI120405042 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0156653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TGACGCCGAA TAAGACCGTC ATCCAGCGCG GGCTGTGGTT CGAGGAGTTC 
GAAACGGGCG TGCTCTACCA GCACCGGCCC GGACGCACTA TCACCGAGGC CGACAATGTC
CTGTTCACCA CCCTGACGAT GAACACCCAG GCGCTGCACC TGGACGCCGC GTTCTCGGAT
GCGTTGCCGC CGTTCCACCA GCGTCTGGTC AACTCGATGT TCACCCTCTC GACGCTGGTC
GGACTGTCGG TCGCCCAACT CACCCAGGGC ACGATCGTCG GCAACCTGGG CTTCGGCGAG
GTCGCATTCC CGAAGCCGCT GTTCCACGGC GACACGCTCT ACGCCGAGAC CGAGGTCGTC
GACAAGCGTG AGTCCAGGAG TCGGCCCGGT GAGGGCATCG TGACGTTCGC CCACACCGGC
CGCAACCAGC ACGGCGACAT CGTGGCCACC GCGTCGCGCA AGACCATGGT GCGCAAGCGC
CCCGAGGGGG AGTGA
 
Protein sequence
MSDMTPNKTV IQRGLWFEEF ETGVLYQHRP GRTITEADNV LFTTLTMNTQ ALHLDAAFSD 
ALPPFHQRLV NSMFTLSTLV GLSVAQLTQG TIVGNLGFGE VAFPKPLFHG DTLYAETEVV
DKRESRSRPG EGIVTFAHTG RNQHGDIVAT ASRKTMVRKR PEGE