Gene Mvan_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3984 
Symbol 
ID4647593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4258754 
End bp4259527 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID639807446 
Producthypothetical protein 
Protein accessionYP_954767 
Protein GI120404938 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG CATCGCACCC CGCGACCAAG CCCGTCCGCG CACTCGGCGG CTTCTTCGCA 
ATGTCGCTGG ACACCTTCAT ATTGATGTTC CAACGGCCAT TCGCCTTTCG CGAATACGTC
ATTCAGACCT GGTTCGTTGC GCGCGTTTCC GTCCTCCCGG CGCTGATGCT GACCATGCCC
TACTCGGTGC TCCTGGTCTT CACGTTCAAC ATCCTGCTCA ATGAGTTTGG CGCGTCGGAC
TTCTCGGGAA CGGGTGCGGC GATCGGCACG GTCAATCAGA TCGGGCCGAT TGTGACGGTG
CTCGTCGTCT CCGGTGCCGG TGCGACGGCA ATGTGCGCCG ACCTGGGAGC GCGCACGATC
CGTGACGAAC TCGACGCACT GCGGGTGATG GGCATCAACC CTGTGCAGGC GTTGGTGGTG
CCCCGGGTGC TTGCGGCCAC CACCGTCGCC CTGGCCCTGT CCGCGTCGGT GATCATCGTC
GGACTGGCCG GCGCATTCTT GTTCTGCGTC TACGTCCAGC ACGTTTCCGC GGGAGCGTTC
ATCTCGGGCT TGACGCTGCT CACCGGCGCA GGCGATGTCG TCGTATCACT GATCAAGGCA
ACCCTTTTCG GGGCGGCAGC CGGCCTGATC GCCTGTTACA AGGGCGTCTA CGTCGGAGGC
GGTCCCGCCG GGGTGGGCAA CGCCGTCAAC GAGACAGTGG TCTTCACCTT CATGGTGCTC
TTCGCGATCA ACGTGATCGT GACCGCGGTC GGTATTCAGT TCACGGTGTC GTGA
 
Protein sequence
MLIASHPATK PVRALGGFFA MSLDTFILMF QRPFAFREYV IQTWFVARVS VLPALMLTMP 
YSVLLVFTFN ILLNEFGASD FSGTGAAIGT VNQIGPIVTV LVVSGAGATA MCADLGARTI
RDELDALRVM GINPVQALVV PRVLAATTVA LALSASVIIV GLAGAFLFCV YVQHVSAGAF
ISGLTLLTGA GDVVVSLIKA TLFGAAAGLI ACYKGVYVGG GPAGVGNAVN ETVVFTFMVL
FAINVIVTAV GIQFTVS