| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3979 |
|---|
| Symbol | |
|---|
| ID | 4646971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4252948 |
|---|
| End bp | 4254225 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639807441 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_954762 |
|---|
| Protein GI | 120404933 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA GACTGCGCCG AGCACGTGGC GGGCTGGCCG CTGTGCTGGT GCTCACCCTG
GCAGCCGGGT TCCTGGTCGC GGCCCGGGCC GCAGACCATG TCGAAAGAAT CTGGGTGACA
GCATATTTCG AGAACAGCAA CGGGCTTTTC GCCGGCGACG ACGTACGCAT CCTCGGCGTG
CCCGTGGGCC GGGTCGACAG TATCCGTCCG GAACCCACGC GGGCCAGGAT CACGTTCTGG
GTGGACCGCA GATACCCCGT CCCGGCCGAT GCCAAGGCAG TGATCTTGTC CCCCCAGCTG
GTGACGGGTC GGGCGATCCA GCTGACACCC GCCTACACCG GGGGACCGGT GATGCCGACC
GGCACGGTCG TCGGGCAGGA GCGCACCGCC GTTCCGGTGG AATGGGACGA CGTGCGAGTT
CAACTGCAGC GCTTGACGAA ACTCCTTCGG CCGACCGAGC CAGGGGGCGT CAGCACCCTT
GGCGCGTTCA TCAACACCAC CGCCGACAAC CTGCGAGGGC AGGGGGCGAA CATCCGCCAG
ACCGTCGTCA AACTGTCCCA GGCCCTCGCG ATACTGGGGG ATCACAGCGA CGACATCTTC
ACCACCTTCA CCAATCTGTC GACTCTGGTG TCGGCGTTGC ACGACAGCGC CGACCTCCTG
GAGCAGCTCA ACCAGAACAT GGCGGCGGTG ACGTCGCTGA TTGCCGACGA TCCACAGAAG
GTCGCGCGCA CAGTGCAGGA TCTGGGCGGG GTCATCGGTG ACGTCAAGGA GTTCGCGGAC
GACAACAGAG AAGCGATCGG CACCGCCACG GACACGCTTG CCTCCGTCAG CACCGCGCTG
GTCGACAGCC TCGACGATCT CAAACAGACG CTGCATATCG CCCCGGGGAC GGTGGCGAAC
TTCCACAACA TCTTCGAGCC GGCCAACGGC TCACTGACGG GCGCGCTCGC CGTGAACAAC
TTCGCCAACC CCATCAGCTT CATCTGCGGT GCGATCCAGG CCGCCTCCCG GCACGGCGCC
GAGCAGTCGG CGAAGCTGTG TGCGCAGTAC CTTGCGCCCA TCGTCAAGAA CCGGCAGTAC
AACTTCCCCC CGATCGGCGA GAACCTCCTG GTGGGAACAC AAGCCAGGCC CAACGAGGTC
ACCTACAGCG AGGACTGGCT ACGGCCCGAC TTCGTCCCGC CCGCCGCCCC GCCCGCCGAT
CAACCGCAAG CAGTCGCGGT CGACCCGGAC GCCGGCCTGC AGGGAATGAT GGTGCCCGCG
GGCGGAGGTG TGTCATGA
|
|---|
| Protein sequence | MSARLRRARG GLAAVLVLTL AAGFLVAARA ADHVERIWVT AYFENSNGLF AGDDVRILGV
PVGRVDSIRP EPTRARITFW VDRRYPVPAD AKAVILSPQL VTGRAIQLTP AYTGGPVMPT
GTVVGQERTA VPVEWDDVRV QLQRLTKLLR PTEPGGVSTL GAFINTTADN LRGQGANIRQ
TVVKLSQALA ILGDHSDDIF TTFTNLSTLV SALHDSADLL EQLNQNMAAV TSLIADDPQK
VARTVQDLGG VIGDVKEFAD DNREAIGTAT DTLASVSTAL VDSLDDLKQT LHIAPGTVAN
FHNIFEPANG SLTGALAVNN FANPISFICG AIQAASRHGA EQSAKLCAQY LAPIVKNRQY
NFPPIGENLL VGTQARPNEV TYSEDWLRPD FVPPAAPPAD QPQAVAVDPD AGLQGMMVPA
GGGVS
|
|---|
| |