Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3629 |
Symbol | |
ID | 4647195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 3862007 |
End bp | 3864559 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639807102 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_954426 |
Protein GI | 120404597 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.739626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTC TATCGCCCTC CGCGGTGGCG TTCTTGACGT TTCCGGTCGT CTACGCGGTG TCGATCCTCG CCGGACGCGC CACCCGGTTG GGTGGCGGCG AGATCGCGCT GGTGTGGCCC GCGGCCGCGG TGGCGACAGT GTGGCTGCTC GCGGCGCGGC GTTTCAGCAG GTGGCAGCGT GTGGCCCACC TGTCGGCGCT AGCCCTCGCG ACGTTCGTGG TGAACCTCTT CACGCACGCC ACGCCGCAGC TCAGCGCATG GTTCGTGCTG GTCAACCTTG CGCTCGCGCT GGTGACCGTC GAGATCATTC ACTATCGCCG CGACGAGGTC GTCCTGCGTG ACCCCACGGA TCTGGTGCGG GTCATCGTCG CGGTAACCGC CGGCACCGTG TGCGCGGCCG CCCTGGCGAC GATGTACCTG GTGCCGGTCA CGGGTGCGCC GGCCTGGGAG ACGTTCGGGC TGTTCACGGC GCGAAACGGG GCGACCGCGC TGATCGGTGT TGCGGCGTGG CTGCGGCTTC GTGACGTCAG GTGGACGCGC CCACGCCTGT CGCCGGCAGC CACCGTCGAG ATCATCGTCA CGGGGGGTGT CGTCGGGTTC GTCCTTGTGT GGATCTTCTG GTTGAGCACC GGGATTCCGC TGGGCTTCCT CGTGCTCCTG CCGGCGATGT GGGTGGCGCT GCGGTACAGC ACCACGGTGA GCACCGTATT CCTGCTCGTG GCTGCGGCGT GGATCATCTA CTCCACACTG TCCGGCAGGG GCGCGTTCAT CGTCCCCGAC ATGCAGCTAC GTGCGCTGTT GGCGCAGGCC ATGGTGTTCA GCCTGACGGT GCTCGTGCTG GCCCTGGCGC TGTTCCGCGA CTCGCGAATG CGCCTGATCG GCCAACTTGA GGCGGCGCGG GATCGCGCGG ATCAGGACTC CGAACTGTTG GGCGCCGTGC TCGACAGCAT CCACGACAGC GTGGTCCTCG CCGACCCGGA CGGTCGGGTG GTCCTGCAGA ACGCCCGGGC GACGGACTCG GGCCTCGTCA GCGATGTCGT GTCGGCAGTG CATACGCCTG GCCTCGTCGA CGACATGGCT GCGTCGGCAT CCCATGCCCC GCGTGACATC GTCGTCTCCG TCGAAGACTC ACGAATCCTC GAACTGGCGA CGACCCCGCT CTCCCGGCAG TCACAGTTCA CCGTGATGGC GTTTCGCGAC GTGACCGAGG AACGCAGAAA TGCCCGGGAA CTGCGCGAGG CACGCGACTT GTTCGCCGGG GTCCTTGAGG CGGCGTCCGA GCAGGCGATC GTCGGCACCG ATCCGTCCGG CTGCATCACC GTGTTCAACA ACGGCGCGGA GCGACTCCTC GGCTGGACCG AAGAGGAGAT GCTCGGCCGC ACCCCGATGG ATTTTCACTA CCCGCCCGAG GTGCGCGCAA GGGCCGAAGA ACTGGGCATA CCCGAAGGCT TCGAGGTCTT CGTCCACAAC GTCACGCCGG ACGCGGCGGA GATACGCGAG TGGACCTTTG TGCGACGCGA CGGCGGCCAC GTCGATGTCA GCCTCGCGGT CTCCCTGATG ACCGATGAGC GCGGCACCTG CGTGGGATAC ATCGGGGTGG CCACCGACAT CACCGACCAG AAGGCCGCCG AACGTGCGCT GGCCGAAAGC GAGGAGAGGT TCCGGCTCGC GTTCGACACC GCACCCGTCG GCATGTTCAT GTTCGATGTC ACCCCCGACG GCACCGGGCG GATCACCCGC TGCAACACGA CCCTGGCCGA CTTCCTCGGC CGGTCGACAG CCGACGTGCT GGGGAGTTCG ACCACCGAGC TCGGCGCCGA CGAAAGTACG TCCTCGACAA AAGGTTTGAC GGGACTCCCC ACGCTGAGAA AAGGAGAGCC GTGGGGCGCA GAGGTGGCCT TTCGGCGAGC AGACGGCGCG ACGGTGTGGG GCGCGGTGTC GGCCTCGCTC GTCGCTCCAC CGGGGGCCGA CCCGTACGGG ATCTGCCTCG TCGAGGACAT CACGAGCCGC AAACGCGCCG AGGCCGACCT TCAGTTTCTG GCCCTGCACG ATCCACTGAC CGGGCTGGCC AACCGCACAC TGTTGATGAA CCGGATGGAG CAAGCACTCG CGGACGAAGG ACGTCACGTC CCCGGTCGTG TCGGACTGCT GTTTCTGGAC CTCGACGGGT TCAAGCCGGT CAACGACACG TGGGGTCACG CGGCGGGCGA CGAGGTACTC AAGGCGGTCG CTCGGCGGAT CGAGAACTCG ATCCGCCCGG GAGACACCGC CGCGCGGCTG GGTGGCGACG AGTTCGCGGT GCTCTGCCCG GTGATCGGCG AAAACGGGGA ATTGCACGGC GTTGCCGAAC GCATCCAGAC CGAGCTGAGC CGACCGCTCA CGTTGATCGG CGGACAGAGC TACGACCAGC TCTCCGCGAG CGTCGGCGTG GCGATGTCGG GCTGCGGGCG CACCGCGGAG GAACTCCTGC ACCACGCCGA CCGGTTGATG TATCACGCCA AACGACAGGG CAACGGCGGC CTCGTCGGTG ATCACACTCC AGCGGGAGCA TGA
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Protein sequence | MKRLSPSAVA FLTFPVVYAV SILAGRATRL GGGEIALVWP AAAVATVWLL AARRFSRWQR VAHLSALALA TFVVNLFTHA TPQLSAWFVL VNLALALVTV EIIHYRRDEV VLRDPTDLVR VIVAVTAGTV CAAALATMYL VPVTGAPAWE TFGLFTARNG ATALIGVAAW LRLRDVRWTR PRLSPAATVE IIVTGGVVGF VLVWIFWLST GIPLGFLVLL PAMWVALRYS TTVSTVFLLV AAAWIIYSTL SGRGAFIVPD MQLRALLAQA MVFSLTVLVL ALALFRDSRM RLIGQLEAAR DRADQDSELL GAVLDSIHDS VVLADPDGRV VLQNARATDS GLVSDVVSAV HTPGLVDDMA ASASHAPRDI VVSVEDSRIL ELATTPLSRQ SQFTVMAFRD VTEERRNARE LREARDLFAG VLEAASEQAI VGTDPSGCIT VFNNGAERLL GWTEEEMLGR TPMDFHYPPE VRARAEELGI PEGFEVFVHN VTPDAAEIRE WTFVRRDGGH VDVSLAVSLM TDERGTCVGY IGVATDITDQ KAAERALAES EERFRLAFDT APVGMFMFDV TPDGTGRITR CNTTLADFLG RSTADVLGSS TTELGADEST SSTKGLTGLP TLRKGEPWGA EVAFRRADGA TVWGAVSASL VAPPGADPYG ICLVEDITSR KRAEADLQFL ALHDPLTGLA NRTLLMNRME QALADEGRHV PGRVGLLFLD LDGFKPVNDT WGHAAGDEVL KAVARRIENS IRPGDTAARL GGDEFAVLCP VIGENGELHG VAERIQTELS RPLTLIGGQS YDQLSASVGV AMSGCGRTAE ELLHHADRLM YHAKRQGNGG LVGDHTPAGA
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