Gene Mvan_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3623 
Symbol 
ID4647189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3854600 
End bp3855442 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content68% 
IMG OID639807096 
Productputative transmembrane protein 
Protein accessionYP_954420 
Protein GI120404591 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.739735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGCT GGGCTTTCCT GCTGCGGCCG CAATGGCTGG CGTTGTTCGT CGTCGTCCTC 
GCGTTCGCCT ACCTGTGCTT CACCGTGCTG GCACCGTGGC AGCTGGGCAA GAACACCAAG
ACCTCCCGGG AGAACGACCA GATCTCCCGG TCCCTGGACG CCGACCCGAT TTCGGTGACA
ACGGTGCTGC CGGAACAGGA TTCGGCCGCC CCGGACGAAC AGTGGCAGCA GGTCACCGCG
ACGGGCCGCT ACCTGCCCGA GGCGCAGGTG CTGGCTCGGC TGCGACTGAT CGACGGCGAT
CCCGCCTTCG AGGTGCTGGT GCCGTTCGCC GTGGACGGCG GCCCGACCGT ACTCGTCGAC
CGCGGCTACG TGCGTCCGAT CGAGGGCTCG AAGGTGCCTC CGATCGACGC ACTCCCGACC
GGGACGGTGA CGATCACCGC CCGGCTGCGG GACTCCGAAG GGGTGGCCCG GGACAAGACG
CCGTTCGAAG CCGACGGTGT CAAGCAGGTC TATTCGATCA ACACAGAGCA GATCTCCTCG
GTCACCGGTG TCCCGTTGGC GGGGTCCTAC CTCCAGCTGG TCGCCGACCA GCCAGGCGGG
CTCGGGGTGA TCCCGCTCCC CCACCTCGAC GCGGGACCGT TCCTGTCCTA CGGCATCCAG
TGGATCGCGT TCGGCATCAT CGCCCCGATC GGCGTCGGCT ATTTCGTATA CAGCGAGATC
CGGGTGCGCC GCCGGGAGAA GGCGTTGGCG GACGCCGCAT CGTCCGAGTC CAGCGGTGAC
GAGCCCGCCG CGCCGCTCAG TACCGAGCAG AAACTCGCCG ACCGCTACGG CAAGCGACGC
TGA
 
Protein sequence
MRRWAFLLRP QWLALFVVVL AFAYLCFTVL APWQLGKNTK TSRENDQISR SLDADPISVT 
TVLPEQDSAA PDEQWQQVTA TGRYLPEAQV LARLRLIDGD PAFEVLVPFA VDGGPTVLVD
RGYVRPIEGS KVPPIDALPT GTVTITARLR DSEGVARDKT PFEADGVKQV YSINTEQISS
VTGVPLAGSY LQLVADQPGG LGVIPLPHLD AGPFLSYGIQ WIAFGIIAPI GVGYFVYSEI
RVRRREKALA DAASSESSGD EPAAPLSTEQ KLADRYGKRR