Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3576 |
Symbol | |
ID | 4644423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 3803084 |
End bp | 3804700 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639807052 |
Product | short chain dehydrogenase |
Protein accession | YP_954376 |
Protein GI | 120404547 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.129186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.037556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACGC AGCGGTTCGT CGAGAGCAGT GACGGTGTCC GGATCGCCGT CTCCGAACAG GGCAATCCGG ACGGGCCCAC ACTCGTGCTG GTGCACGGAC TTCGCGACAC CCACCGGGTC TGGGATCCGG TGGTGGCGCT GCTGGCCGAC CGGTTCAGAA TCGTCGCCTA CGACACCAGG GGAGCGGGCA ACTCCGGTGC GCCCAAACAG ACTTCGGCAT ACACCGTCGA TCGGTTCGCC GACGACTTCG CGGCCGTCGC CGCCGCCGTC GGCGGTGACA CACCCGTGCA CGTGCTGGCG CACGGATGGG GGGCCGCCGG GGTGTGGCAG TACCTCAAGC GCGCCGACGC CCCCGAGCGG GTCGCATCGC TGACCTCGGT GTCGGGCCCC AGCCCCGAGC ACGTCGCCGG ATATGTGCGC GCCGCGCTGA CCAGCCCGCG CCGGTTCGTC CGCGGCGCCG GCCAGCTCGT GCGCCTCGCC GCGGCCGCAC CGCGGGCGGC GACGGCCAAG CCGTACCGGG CGAATCTGCG GCCCGCCGCG CCGGCGGGTG TTCCCGTCGA CGTCCCGGTG CAGCTGATCG TCCCCGACCA CGACCCACAC GTGGGGCCGC ACGTCTACGA CGGCATGTCC GCGTCGGTCT CGAGGCTGTG GCGGCGCGAC ATCAAGACCG GCGACCTCTC GCCGGGCTCA CATCCGCAGG TCCTCGCACG GGCGGTCGAC CAGCTGGTCG ACCACCTCGG CGGCGCCCCG GCCCCGCGAG AGTTGTTGCG CGCGCAGGTC GGCCGCGCCC GCAAGGTGTT CGGCGACACC CTGGTGTCCG TCACCGGCGC CGCCAGCGGG ATCGGACGCG AGACCGCGCT GGCGTTCGCC CGGGCCGGTG CCGACGTGGT GATCAGCGAC GTCGACGAGG CCGGGCTGGA GCAGACCGCG CGGCTGGTCA CCGCGGCCGG GGCGGCGGCG CACAGTTACA CCGTCGACGT CGCCGACGCC GCAGCCGTCG AGGCGATGGC CGAACTCGTG TGCGCCGCCC ACGGGGTGCC CGACATCGTG GTCAACAACG CGGGCGTCGG GCACGCCGGG TTCTTCCTCG ACACCCCGGC CGAGGAGTTC GACCGGGTGC TCGGCATCAA CTTCGGCGGT GTCGTCAACG GGTGCCGGTC GTGGGGGAGG CGCCTCGTCG ACCGCGGCAC CGGCGGCCAC ATCGTCAACG TCGCGTCGAT GGCGTCCTAC ACGCCGGTCA ACGTGATGAA CGCCTACTGC ACGTCCAAGG CGGCCGTCTT CATGTTCTCC GATTGTCTAC GCGCAGAACT GGATTCGGCC GGAATCGGGG TCACCACGAT CTGTCCGGGT GTGATCGGCA CCAACATCGT CGACACCACC CGCTTCTCGC TGCCGGAGGC CCGCCGAGAC GACGCGGAAT CGATCCGCCG ACGGGCCCGC CAGGGCTTCG CGGTGCGACG GGTCGGACCC GACAAGGTGG CCAAGGCCAT CGTCGCGGCG GTCCAGAAGA ACAAGCCGGT GCGGCCCGTC ACCACGGAGG CGTACCTCGT CTACGGCGTC GCACACGCGC TGCCGCAGGC CATGCGCAGC GCGGCCCGCG GCGGGAACAT CATGTGA
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Protein sequence | MSTQRFVESS DGVRIAVSEQ GNPDGPTLVL VHGLRDTHRV WDPVVALLAD RFRIVAYDTR GAGNSGAPKQ TSAYTVDRFA DDFAAVAAAV GGDTPVHVLA HGWGAAGVWQ YLKRADAPER VASLTSVSGP SPEHVAGYVR AALTSPRRFV RGAGQLVRLA AAAPRAATAK PYRANLRPAA PAGVPVDVPV QLIVPDHDPH VGPHVYDGMS ASVSRLWRRD IKTGDLSPGS HPQVLARAVD QLVDHLGGAP APRELLRAQV GRARKVFGDT LVSVTGAASG IGRETALAFA RAGADVVISD VDEAGLEQTA RLVTAAGAAA HSYTVDVADA AAVEAMAELV CAAHGVPDIV VNNAGVGHAG FFLDTPAEEF DRVLGINFGG VVNGCRSWGR RLVDRGTGGH IVNVASMASY TPVNVMNAYC TSKAAVFMFS DCLRAELDSA GIGVTTICPG VIGTNIVDTT RFSLPEARRD DAESIRRRAR QGFAVRRVGP DKVAKAIVAA VQKNKPVRPV TTEAYLVYGV AHALPQAMRS AARGGNIM
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