Gene Mvan_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3550 
Symbol 
ID4647934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3775409 
End bp3776545 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content73% 
IMG OID639807027 
Productglycosyl transferase, group 1 
Protein accessionYP_954351 
Protein GI120404522 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.750733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAA TCCTGCTCGT CACCAACGAC TATCCGCCGC GCCGCGGCGG CATCCAGGCG 
TACCTGGAAG CTCTCGTCGA GCATCTGGTG GCGTCCGGCG AGCACAGCCT GACCGTGTAC
GCGCCGAAGT GGAAGGGCGC CGAGGACTAC GACTCCGTCG CCGCAGCCAC CGGGTACGAG
GTGGTCCGGC ATCCGGGGAC GCTGATGGTG CCCGAGCCGA CGGTGGCGCT GCGGATGCGG
CGGCTCATCC GCGAGCGCGG CATCGACACC GTGTGGTTCG GCGCCGCCGC GCCGCTCGCG
CTGTTGGCGC CGCTGGCCCG CGCCGCCGGC GCCCGGCGCG TCATCGCCAG CACCCACGGC
CACGAAGTCG GCTGGTCGAT GCTGCCGTTG GCGCGAACGG CCTTGCGCCG CATAGGAAAT
GACACCGATG TCGTCACCTT CATCAGCGCC TACACGCGGG GACGGTTCGC GTCGGCGTTC
GGGCCGCACG CGGCGCTGGA ACACGTGCCG CCGGGCGTGG ACACCGACCG GTTCGTCCCC
GACGAGGTGG CCAGGGCCGA ACTGCGGGCC CGTTACGGCC TGGGTGAGCG GCCCGTGGTG
GTCTGTGTGT CGCGGCTGGT GCCACGCAAG GGGCAGGACA TGCTGATCAG GGCGCTCCCG
GCGATCCGGC AGCGGGTTCC CGGCGCGGCG CTCGTCATCG TGGGAGGCGG CCCGTACCGG
ACCGCCTTGC ATCGGCTCGC GCACACCTTC GGGGTGGCCG AAGACGTGGT GTTCACCGAC
GGTGTGCCCG GCGAGGAACT GCCCGCCCAT CACGCGATGG CCGACGTGTT CGCGATGCCC
TGCCGGACCC GGGGCTCCGG ACTGGACGTC GAGGGCCTCG GGATCGTCTA CCTGGAGGCA
TCCTCCACCG GGGTGCCGGT GGTGGCGGGC CGGTCCGGCG GGGCTCCGGA GACCGTCGTC
GACGGGGAGA CGGGCGTCGT CGTCGACGGG TGGGACGTCG GGGCGATCGC CGCCGCCGTC
GGCGACCTGC TGGCCGACCC GGCCCGCGCC GCGGCAATGG GCGCGGCGGG CCGACAGGCG
GTGCTGGACA ACTGGCGCTG GAGCAGGCAG GCCGAGAAGC TGGCCCGCCT GCTTTAA
 
Protein sequence
MKRILLVTND YPPRRGGIQA YLEALVEHLV ASGEHSLTVY APKWKGAEDY DSVAAATGYE 
VVRHPGTLMV PEPTVALRMR RLIRERGIDT VWFGAAAPLA LLAPLARAAG ARRVIASTHG
HEVGWSMLPL ARTALRRIGN DTDVVTFISA YTRGRFASAF GPHAALEHVP PGVDTDRFVP
DEVARAELRA RYGLGERPVV VCVSRLVPRK GQDMLIRALP AIRQRVPGAA LVIVGGGPYR
TALHRLAHTF GVAEDVVFTD GVPGEELPAH HAMADVFAMP CRTRGSGLDV EGLGIVYLEA
SSTGVPVVAG RSGGAPETVV DGETGVVVDG WDVGAIAAAV GDLLADPARA AAMGAAGRQA
VLDNWRWSRQ AEKLARLL