Gene Mvan_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3411 
Symbol 
ID4646021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3626049 
End bp3627086 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content67% 
IMG OID639806888 
Productaliphatic sulfonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_954213 
Protein GI120404384 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0201721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.325708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAA AAACCACCCT GGTGGCACGA TCCGTTGCCG TGCTCGCGGT GCTGGGCCTG 
CTGCTCACCG GCTGCGTGTC GCGCGACGAG GCGTCGGGAG CTCAGGAGGC ACCCGAGACG
GTGCCGTTGA CCGAGCTGGC CGACCTCACC CTGCAGATCG GAGACCAGAA GGGCGGCACC
GAATCGCTGC TGCGAGCCGC CGGCGTCCTC GACGATCTCC CGTACAAGAT TGCGTTCTCG
ACGTTCACCT CGGGCCCTCC GCAGGTCGAG GCCGCGACGG CGGGCAAGAT CGACTTCGCG
ATCACCGGCA ACACGCCGCC GATCTTCGGC GCCGCCTCCG GGGCGAAGGT CAAGGTAGTG
GCGGCCTACG ACGGCGGCGG CGGGGGTGAC CAGATCCTGG TCCACACCGA TTCGCCGATC
ACCGAGATCG CCGAGTTGCG CGGTAAGCGC ATCGCCGTGG GCAAGGGAAG TTCGGCCCAC
GGGCATATCC TGGCGCAGCT GAAGAGTGTC GGGTTGACGC CGAACGACGT GACCCTGGTC
TTTCTGCAAC CCGCCGATGC GTTGTCGGCA TTCACCCAAC GCGAGGCCGA CGCCTGGGCC
ATCTGGGATC CCTACACCGC GCAGACCGCG TCGCAGCTCC CGGTGCGCAG CATCGGGCAG
GCCAAGGACG TCACCAACGG GTACTGGTTC GGGGTGGCCT CCGATCAGGC GCTGGCAGAT
CCGAAGCGCA ACACCGCGCT GGCCGACCTG CTCGTCCGCT TCGAGAAGGC CGCCCGGTGG
GCGCAGGACA ACCCGCAGCA GTGGGCAAGG AGCTACTCCG AGGCGGTCGG ACTGGATCTC
AACATCGCCG AGGTGTCGCA GTCGCGCAGT CTGCGGCTGC CCACCGAGCT CGACGACGAG
GTGGTGGCAT CTGAACAGAA GATCGCCGAC CTGTTCGCCG ATGCCGGTCA GATCGCCTCT
CCTGCACCTG AATTCGACAA GTGGGTGGAC CGAAGGTACA ACGACGTGCT GCGGCCGCTG
CTGATCTCGA CCAACTAG
 
Protein sequence
MSAKTTLVAR SVAVLAVLGL LLTGCVSRDE ASGAQEAPET VPLTELADLT LQIGDQKGGT 
ESLLRAAGVL DDLPYKIAFS TFTSGPPQVE AATAGKIDFA ITGNTPPIFG AASGAKVKVV
AAYDGGGGGD QILVHTDSPI TEIAELRGKR IAVGKGSSAH GHILAQLKSV GLTPNDVTLV
FLQPADALSA FTQREADAWA IWDPYTAQTA SQLPVRSIGQ AKDVTNGYWF GVASDQALAD
PKRNTALADL LVRFEKAARW AQDNPQQWAR SYSEAVGLDL NIAEVSQSRS LRLPTELDDE
VVASEQKIAD LFADAGQIAS PAPEFDKWVD RRYNDVLRPL LISTN