Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3411 |
Symbol | |
ID | 4646021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 3626049 |
End bp | 3627086 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639806888 |
Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_954213 |
Protein GI | 120404384 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0201721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.325708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAA AAACCACCCT GGTGGCACGA TCCGTTGCCG TGCTCGCGGT GCTGGGCCTG CTGCTCACCG GCTGCGTGTC GCGCGACGAG GCGTCGGGAG CTCAGGAGGC ACCCGAGACG GTGCCGTTGA CCGAGCTGGC CGACCTCACC CTGCAGATCG GAGACCAGAA GGGCGGCACC GAATCGCTGC TGCGAGCCGC CGGCGTCCTC GACGATCTCC CGTACAAGAT TGCGTTCTCG ACGTTCACCT CGGGCCCTCC GCAGGTCGAG GCCGCGACGG CGGGCAAGAT CGACTTCGCG ATCACCGGCA ACACGCCGCC GATCTTCGGC GCCGCCTCCG GGGCGAAGGT CAAGGTAGTG GCGGCCTACG ACGGCGGCGG CGGGGGTGAC CAGATCCTGG TCCACACCGA TTCGCCGATC ACCGAGATCG CCGAGTTGCG CGGTAAGCGC ATCGCCGTGG GCAAGGGAAG TTCGGCCCAC GGGCATATCC TGGCGCAGCT GAAGAGTGTC GGGTTGACGC CGAACGACGT GACCCTGGTC TTTCTGCAAC CCGCCGATGC GTTGTCGGCA TTCACCCAAC GCGAGGCCGA CGCCTGGGCC ATCTGGGATC CCTACACCGC GCAGACCGCG TCGCAGCTCC CGGTGCGCAG CATCGGGCAG GCCAAGGACG TCACCAACGG GTACTGGTTC GGGGTGGCCT CCGATCAGGC GCTGGCAGAT CCGAAGCGCA ACACCGCGCT GGCCGACCTG CTCGTCCGCT TCGAGAAGGC CGCCCGGTGG GCGCAGGACA ACCCGCAGCA GTGGGCAAGG AGCTACTCCG AGGCGGTCGG ACTGGATCTC AACATCGCCG AGGTGTCGCA GTCGCGCAGT CTGCGGCTGC CCACCGAGCT CGACGACGAG GTGGTGGCAT CTGAACAGAA GATCGCCGAC CTGTTCGCCG ATGCCGGTCA GATCGCCTCT CCTGCACCTG AATTCGACAA GTGGGTGGAC CGAAGGTACA ACGACGTGCT GCGGCCGCTG CTGATCTCGA CCAACTAG
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Protein sequence | MSAKTTLVAR SVAVLAVLGL LLTGCVSRDE ASGAQEAPET VPLTELADLT LQIGDQKGGT ESLLRAAGVL DDLPYKIAFS TFTSGPPQVE AATAGKIDFA ITGNTPPIFG AASGAKVKVV AAYDGGGGGD QILVHTDSPI TEIAELRGKR IAVGKGSSAH GHILAQLKSV GLTPNDVTLV FLQPADALSA FTQREADAWA IWDPYTAQTA SQLPVRSIGQ AKDVTNGYWF GVASDQALAD PKRNTALADL LVRFEKAARW AQDNPQQWAR SYSEAVGLDL NIAEVSQSRS LRLPTELDDE VVASEQKIAD LFADAGQIAS PAPEFDKWVD RRYNDVLRPL LISTN
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