Gene Mvan_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3324 
Symbol 
ID4644521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3538181 
End bp3538990 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content67% 
IMG OID639806801 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_954127 
Protein GI120404298 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.377978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATGGCGC CGACAGAGGA GCACCGCGTG GAGTTCAGCA ACGTCACCGC ATTGGTCACC 
GGTGCGAGCG GAGGGATCGG CGAGGAGTTC GCCGTTCAGC TCGCCCGCCG TGGCGCGAAC
CTGATCCTTG TCGCACGCCG GGCCGAGAAG CTGGCCGCGC TGCAGCACAC CCTCACCAGC
CGCCACCCCG GGATCGTGGT CGACGTCCTG ACCGTCGACC TCGCCCTGCC GGGTTCGGCC
GCCGAGCTCG AAGCCGCAGT TCGCGAACTG GGCCGCACCG TCGACGTCCT GATCAACAAC
GCCGGTGTCG GGTTGCACGG CAAGTTCGCG ACACAGGAGC CTGCTCCGAA CGCCGCCCAG
ATCCAGTTGA ACTGCGGGAC TTTGGTCGAT CTGACGGCGC GCTTCCTGCC TCCGATGATC
GAACGCAGGC ATGGCGTCGT CCTCAATCTC GCGTCGACGG CGGCGTTCCA GCCGACTCCC
GGTATGGCCG TCTACGGCGC CACCAAGGCG TTCGTGTTGT CCTTCACCGA GGCGCTGTGG
CAGGAGTGCC GGGGCTCGGG GGTCAGGGTC CTCGCGCTGT GCCCCGGAGC CACAGAGACC
GAGTTCTTCG ACCGGACCGG CGAGGAATTC CTCACCGACG GCAGGCAGAC CTCCCGACAG
GTTGTCGACA CTGCGTTCGC CGCGCTCGAC GGATCCTCGC CGACAGTGAT CTCGGGCTTC
CGCAACAAGC TGTTGGCCTC CGGCTATCGC GTATCGCCGC GGAAGGTCCT GCTCGCGGTC
TCGGAGTACA TGCTCAAGGC CAACCGCTGA
 
Protein sequence
MMAPTEEHRV EFSNVTALVT GASGGIGEEF AVQLARRGAN LILVARRAEK LAALQHTLTS 
RHPGIVVDVL TVDLALPGSA AELEAAVREL GRTVDVLINN AGVGLHGKFA TQEPAPNAAQ
IQLNCGTLVD LTARFLPPMI ERRHGVVLNL ASTAAFQPTP GMAVYGATKA FVLSFTEALW
QECRGSGVRV LALCPGATET EFFDRTGEEF LTDGRQTSRQ VVDTAFAALD GSSPTVISGF
RNKLLASGYR VSPRKVLLAV SEYMLKANR